Protein–RNA interactions for Protein: Q8R307

Vps18, Vacuolar protein sorting-associated protein 18 homolog, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps18Q8R307 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Vps18Q8R307 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Vps18Q8R307 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Vps18Q8R307 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
Vps18Q8R307 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Vps18Q8R307 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Vps18Q8R307 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Vps18Q8R307 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Vps18Q8R307 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.12■■■□□ 2.09
Vps18Q8R307 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Vps18Q8R307 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
Vps18Q8R307 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Vps18Q8R307 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC28.09■■■□□ 2.09
Vps18Q8R307 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Vps18Q8R307 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Vps18Q8R307 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC28.06■■■□□ 2.08
Vps18Q8R307 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Vps18Q8R307 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Vps18Q8R307 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC28.03■■■□□ 2.08
Vps18Q8R307 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Vps18Q8R307 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
Vps18Q8R307 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Vps18Q8R307 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Vps18Q8R307 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC28■■■□□ 2.07
Vps18Q8R307 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28■■■□□ 2.07
Vps18Q8R307 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Vps18Q8R307 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Vps18Q8R307 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Vps18Q8R307 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.96■■■□□ 2.07
Vps18Q8R307 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Vps18Q8R307 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC27.95■■■□□ 2.07
Vps18Q8R307 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.95■■■□□ 2.07
Vps18Q8R307 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
Vps18Q8R307 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27.94■■■□□ 2.06
Vps18Q8R307 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC27.92■■■□□ 2.06
Vps18Q8R307 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC27.9■■■□□ 2.06
Vps18Q8R307 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC27.9■■■□□ 2.06
Vps18Q8R307 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Vps18Q8R307 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Vps18Q8R307 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC27.88■■■□□ 2.05
Vps18Q8R307 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27.87■■■□□ 2.05
Vps18Q8R307 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC27.86■■■□□ 2.05
Vps18Q8R307 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC27.86■■■□□ 2.05
Vps18Q8R307 Gm43445-201ENSMUST00000198564 2091 ntBASIC27.86■■■□□ 2.05
Vps18Q8R307 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Vps18Q8R307 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Vps18Q8R307 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Vps18Q8R307 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Vps18Q8R307 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Vps18Q8R307 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
Vps18Q8R307 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.81■■■□□ 2.04
Vps18Q8R307 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Vps18Q8R307 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
Vps18Q8R307 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Vps18Q8R307 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Vps18Q8R307 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Vps18Q8R307 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC27.78■■■□□ 2.04
Vps18Q8R307 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Vps18Q8R307 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.04
Vps18Q8R307 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
Vps18Q8R307 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC27.75■■■□□ 2.03
Vps18Q8R307 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Vps18Q8R307 Gm26115-201ENSMUST00000175605 87 ntBASIC27.74■■■□□ 2.03
Vps18Q8R307 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Vps18Q8R307 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
Vps18Q8R307 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
Vps18Q8R307 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Vps18Q8R307 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
Vps18Q8R307 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Vps18Q8R307 Amer2-203ENSMUST00000225247 2662 ntBASIC27.67■■■□□ 2.02
Vps18Q8R307 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Vps18Q8R307 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
Vps18Q8R307 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Vps18Q8R307 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
Vps18Q8R307 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
Vps18Q8R307 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC27.64■■■□□ 2.01
Vps18Q8R307 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC27.63■■■□□ 2.01
Vps18Q8R307 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC27.63■■■□□ 2.01
Vps18Q8R307 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Vps18Q8R307 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Vps18Q8R307 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC27.62■■■□□ 2.01
Vps18Q8R307 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Vps18Q8R307 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Vps18Q8R307 Gm8109-201ENSMUST00000194076 746 ntBASIC27.58■■■□□ 2.01
Vps18Q8R307 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Vps18Q8R307 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC27.56■■■□□ 2
Vps18Q8R307 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Vps18Q8R307 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC27.55■■■□□ 2
Vps18Q8R307 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Vps18Q8R307 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC27.53■■■□□ 2
Vps18Q8R307 Gm17082-201ENSMUST00000166043 1091 ntBASIC27.53■■■□□ 2
Vps18Q8R307 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC27.52■■■□□ 2
Vps18Q8R307 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC27.52■■■□□ 2
Vps18Q8R307 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC27.5■■□□□ 1.99
Vps18Q8R307 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Vps18Q8R307 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Vps18Q8R307 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Vps18Q8R307 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Vps18Q8R307 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC27.47■■□□□ 1.99
Vps18Q8R307 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC27.47■■□□□ 1.99
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms