Protein–RNA interactions for Protein: Q8BX39

Cphx2, Cytoplasmic polyadenylated homeobox, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cphx2Q8BX39 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cphx2Q8BX39 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cphx2Q8BX39 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cphx2Q8BX39 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cphx2Q8BX39 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cphx2Q8BX39 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cphx2Q8BX39 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cphx2Q8BX39 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cphx2Q8BX39 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cphx2Q8BX39 Gm25262-201ENSMUST00000174934 133 ntBASIC19.39■□□□□ 0.69
Cphx2Q8BX39 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cphx2Q8BX39 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cphx2Q8BX39 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cphx2Q8BX39 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Cphx2Q8BX39 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cphx2Q8BX39 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cphx2Q8BX39 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cphx2Q8BX39 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cphx2Q8BX39 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Cphx2Q8BX39 Gm6658-202ENSMUST00000209493 1885 ntBASIC19.35■□□□□ 0.69
Cphx2Q8BX39 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC19.35■□□□□ 0.69
Cphx2Q8BX39 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cphx2Q8BX39 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC19.31■□□□□ 0.68
Cphx2Q8BX39 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC19.3■□□□□ 0.68
Cphx2Q8BX39 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cphx2Q8BX39 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Cphx2Q8BX39 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cphx2Q8BX39 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Cphx2Q8BX39 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cphx2Q8BX39 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cphx2Q8BX39 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cphx2Q8BX39 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cphx2Q8BX39 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC19.27■□□□□ 0.67
Cphx2Q8BX39 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cphx2Q8BX39 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cphx2Q8BX39 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cphx2Q8BX39 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.23■□□□□ 0.67
Cphx2Q8BX39 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cphx2Q8BX39 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cphx2Q8BX39 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Cphx2Q8BX39 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cphx2Q8BX39 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cphx2Q8BX39 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Cphx2Q8BX39 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC19.2■□□□□ 0.66
Cphx2Q8BX39 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cphx2Q8BX39 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
Cphx2Q8BX39 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cphx2Q8BX39 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cphx2Q8BX39 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cphx2Q8BX39 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cphx2Q8BX39 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cphx2Q8BX39 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.15■□□□□ 0.66
Cphx2Q8BX39 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cphx2Q8BX39 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cphx2Q8BX39 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.11■□□□□ 0.65
Cphx2Q8BX39 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cphx2Q8BX39 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cphx2Q8BX39 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Cphx2Q8BX39 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cphx2Q8BX39 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cphx2Q8BX39 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Cphx2Q8BX39 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cphx2Q8BX39 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cphx2Q8BX39 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cphx2Q8BX39 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Cphx2Q8BX39 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Cphx2Q8BX39 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Cphx2Q8BX39 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cphx2Q8BX39 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.05■□□□□ 0.64
Cphx2Q8BX39 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cphx2Q8BX39 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cphx2Q8BX39 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Cphx2Q8BX39 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cphx2Q8BX39 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cphx2Q8BX39 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cphx2Q8BX39 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cphx2Q8BX39 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cphx2Q8BX39 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC18.99■□□□□ 0.63
Cphx2Q8BX39 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cphx2Q8BX39 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cphx2Q8BX39 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cphx2Q8BX39 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cphx2Q8BX39 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cphx2Q8BX39 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cphx2Q8BX39 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cphx2Q8BX39 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cphx2Q8BX39 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cphx2Q8BX39 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC18.96■□□□□ 0.63
Cphx2Q8BX39 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC18.96■□□□□ 0.63
Cphx2Q8BX39 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cphx2Q8BX39 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Cphx2Q8BX39 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC18.95■□□□□ 0.62
Cphx2Q8BX39 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cphx2Q8BX39 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cphx2Q8BX39 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Cphx2Q8BX39 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cphx2Q8BX39 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cphx2Q8BX39 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cphx2Q8BX39 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cphx2Q8BX39 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms