Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Slc5a7Q8BGY9 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC22.8■■□□□ 1.24
Slc5a7Q8BGY9 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Slc5a7Q8BGY9 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Slc5a7Q8BGY9 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.78■■□□□ 1.24
Slc5a7Q8BGY9 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Slc5a7Q8BGY9 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Slc5a7Q8BGY9 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
Slc5a7Q8BGY9 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.75■■□□□ 1.23
Slc5a7Q8BGY9 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Slc5a7Q8BGY9 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Slc5a7Q8BGY9 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Slc5a7Q8BGY9 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC22.72■■□□□ 1.23
Slc5a7Q8BGY9 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Slc5a7Q8BGY9 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Slc5a7Q8BGY9 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Slc5a7Q8BGY9 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Slc5a7Q8BGY9 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Slc5a7Q8BGY9 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
Slc5a7Q8BGY9 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Slc5a7Q8BGY9 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Slc5a7Q8BGY9 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Slc5a7Q8BGY9 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Slc5a7Q8BGY9 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Slc5a7Q8BGY9 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC22.67■■□□□ 1.22
Slc5a7Q8BGY9 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Slc5a7Q8BGY9 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC22.65■■□□□ 1.22
Slc5a7Q8BGY9 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Slc5a7Q8BGY9 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Slc5a7Q8BGY9 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC22.62■■□□□ 1.21
Slc5a7Q8BGY9 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Slc5a7Q8BGY9 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Slc5a7Q8BGY9 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Slc5a7Q8BGY9 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Slc5a7Q8BGY9 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Slc5a7Q8BGY9 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Slc5a7Q8BGY9 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Slc5a7Q8BGY9 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Slc5a7Q8BGY9 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Slc5a7Q8BGY9 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Slc5a7Q8BGY9 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Slc5a7Q8BGY9 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Slc5a7Q8BGY9 Amer2-203ENSMUST00000225247 2662 ntBASIC22.53■■□□□ 1.2
Slc5a7Q8BGY9 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Slc5a7Q8BGY9 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Slc5a7Q8BGY9 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Slc5a7Q8BGY9 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Slc5a7Q8BGY9 Gm25238-201ENSMUST00000174914 89 ntBASIC22.48■■□□□ 1.19
Slc5a7Q8BGY9 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Slc5a7Q8BGY9 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Slc5a7Q8BGY9 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.44■■□□□ 1.18
Slc5a7Q8BGY9 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.44■■□□□ 1.18
Slc5a7Q8BGY9 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Slc5a7Q8BGY9 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
Slc5a7Q8BGY9 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Slc5a7Q8BGY9 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Slc5a7Q8BGY9 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Slc5a7Q8BGY9 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Slc5a7Q8BGY9 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
Slc5a7Q8BGY9 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Slc5a7Q8BGY9 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Slc5a7Q8BGY9 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC22.36■■□□□ 1.17
Slc5a7Q8BGY9 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Slc5a7Q8BGY9 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Slc5a7Q8BGY9 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC22.36■■□□□ 1.17
Slc5a7Q8BGY9 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Slc5a7Q8BGY9 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Slc5a7Q8BGY9 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Slc5a7Q8BGY9 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.34■■□□□ 1.17
Slc5a7Q8BGY9 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Slc5a7Q8BGY9 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.31■■□□□ 1.16
Slc5a7Q8BGY9 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Slc5a7Q8BGY9 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Slc5a7Q8BGY9 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Slc5a7Q8BGY9 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Slc5a7Q8BGY9 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC22.29■■□□□ 1.16
Slc5a7Q8BGY9 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Slc5a7Q8BGY9 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Slc5a7Q8BGY9 Mipep-204ENSMUST00000225043 1548 ntBASIC22.26■■□□□ 1.15
Slc5a7Q8BGY9 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC22.25■■□□□ 1.15
Slc5a7Q8BGY9 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Slc5a7Q8BGY9 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Slc5a7Q8BGY9 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Slc5a7Q8BGY9 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Slc5a7Q8BGY9 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC22.23■■□□□ 1.15
Slc5a7Q8BGY9 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Slc5a7Q8BGY9 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC22.23■■□□□ 1.15
Slc5a7Q8BGY9 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Slc5a7Q8BGY9 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Slc5a7Q8BGY9 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Slc5a7Q8BGY9 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Slc5a7Q8BGY9 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Slc5a7Q8BGY9 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Slc5a7Q8BGY9 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Slc5a7Q8BGY9 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Slc5a7Q8BGY9 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.17■■□□□ 1.14
Slc5a7Q8BGY9 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Slc5a7Q8BGY9 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Slc5a7Q8BGY9 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Slc5a7Q8BGY9 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms