Protein–RNA interactions for Protein: Q8BG21

Cacfd1, Calcium channel flower homolog, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacfd1Q8BG21 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.43■■□□□ 1.02
Cacfd1Q8BG21 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Cacfd1Q8BG21 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.4■■□□□ 1.02
Cacfd1Q8BG21 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cacfd1Q8BG21 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cacfd1Q8BG21 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Cacfd1Q8BG21 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cacfd1Q8BG21 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cacfd1Q8BG21 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cacfd1Q8BG21 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Cacfd1Q8BG21 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Cacfd1Q8BG21 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Cacfd1Q8BG21 Gm25238-201ENSMUST00000174914 89 ntBASIC21.33■■□□□ 1.01
Cacfd1Q8BG21 Zfp131-207ENSMUST00000224946 1783 ntBASIC21.31■■□□□ 1
Cacfd1Q8BG21 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cacfd1Q8BG21 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC21.3■■□□□ 1
Cacfd1Q8BG21 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Cacfd1Q8BG21 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cacfd1Q8BG21 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cacfd1Q8BG21 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.28■■□□□ 1
Cacfd1Q8BG21 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cacfd1Q8BG21 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Cacfd1Q8BG21 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cacfd1Q8BG21 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cacfd1Q8BG21 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
Cacfd1Q8BG21 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cacfd1Q8BG21 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cacfd1Q8BG21 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cacfd1Q8BG21 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21.2■□□□□ 0.98
Cacfd1Q8BG21 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
Cacfd1Q8BG21 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21.2■□□□□ 0.98
Cacfd1Q8BG21 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cacfd1Q8BG21 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
Cacfd1Q8BG21 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.18■□□□□ 0.98
Cacfd1Q8BG21 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cacfd1Q8BG21 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cacfd1Q8BG21 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cacfd1Q8BG21 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cacfd1Q8BG21 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cacfd1Q8BG21 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cacfd1Q8BG21 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cacfd1Q8BG21 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cacfd1Q8BG21 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Cacfd1Q8BG21 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cacfd1Q8BG21 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cacfd1Q8BG21 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cacfd1Q8BG21 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cacfd1Q8BG21 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21.09■□□□□ 0.97
Cacfd1Q8BG21 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cacfd1Q8BG21 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Cacfd1Q8BG21 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Cacfd1Q8BG21 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cacfd1Q8BG21 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cacfd1Q8BG21 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cacfd1Q8BG21 Amer2-203ENSMUST00000225247 2662 ntBASIC21.07■□□□□ 0.96
Cacfd1Q8BG21 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cacfd1Q8BG21 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cacfd1Q8BG21 Rab21-202ENSMUST00000218831 843 ntBASIC21.03■□□□□ 0.96
Cacfd1Q8BG21 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cacfd1Q8BG21 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cacfd1Q8BG21 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cacfd1Q8BG21 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC21.02■□□□□ 0.96
Cacfd1Q8BG21 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Cacfd1Q8BG21 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Cacfd1Q8BG21 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cacfd1Q8BG21 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Cacfd1Q8BG21 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.99■□□□□ 0.95
Cacfd1Q8BG21 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.98■□□□□ 0.95
Cacfd1Q8BG21 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.98■□□□□ 0.95
Cacfd1Q8BG21 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
Cacfd1Q8BG21 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Cacfd1Q8BG21 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cacfd1Q8BG21 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Cacfd1Q8BG21 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cacfd1Q8BG21 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.95■□□□□ 0.94
Cacfd1Q8BG21 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cacfd1Q8BG21 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cacfd1Q8BG21 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Cacfd1Q8BG21 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.94■□□□□ 0.94
Cacfd1Q8BG21 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC20.93■□□□□ 0.94
Cacfd1Q8BG21 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cacfd1Q8BG21 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cacfd1Q8BG21 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cacfd1Q8BG21 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cacfd1Q8BG21 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cacfd1Q8BG21 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Cacfd1Q8BG21 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Cacfd1Q8BG21 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cacfd1Q8BG21 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cacfd1Q8BG21 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cacfd1Q8BG21 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cacfd1Q8BG21 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cacfd1Q8BG21 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Cacfd1Q8BG21 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cacfd1Q8BG21 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cacfd1Q8BG21 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Cacfd1Q8BG21 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cacfd1Q8BG21 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cacfd1Q8BG21 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cacfd1Q8BG21 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms