Protein–RNA interactions for Protein: Q80WR1

Tspan18, Tetraspanin-18, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan18Q80WR1 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Tspan18Q80WR1 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC28.48■■■□□ 2.15
Tspan18Q80WR1 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Tspan18Q80WR1 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC28.46■■■□□ 2.15
Tspan18Q80WR1 Peli2-204ENSMUST00000226513 1320 ntBASIC28.46■■■□□ 2.15
Tspan18Q80WR1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28.45■■■□□ 2.14
Tspan18Q80WR1 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC28.43■■■□□ 2.14
Tspan18Q80WR1 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC28.43■■■□□ 2.14
Tspan18Q80WR1 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Tspan18Q80WR1 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Tspan18Q80WR1 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Tspan18Q80WR1 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
Tspan18Q80WR1 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Tspan18Q80WR1 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
Tspan18Q80WR1 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Tspan18Q80WR1 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Tspan18Q80WR1 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC28.36■■■□□ 2.13
Tspan18Q80WR1 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Tspan18Q80WR1 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Tspan18Q80WR1 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Tspan18Q80WR1 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Tspan18Q80WR1 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC28.3■■■□□ 2.12
Tspan18Q80WR1 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC28.27■■■□□ 2.12
Tspan18Q80WR1 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Tspan18Q80WR1 Gm16148-201ENSMUST00000119653 893 ntBASIC28.23■■■□□ 2.11
Tspan18Q80WR1 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Tspan18Q80WR1 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC28.23■■■□□ 2.11
Tspan18Q80WR1 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC28.22■■■□□ 2.11
Tspan18Q80WR1 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Tspan18Q80WR1 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Tspan18Q80WR1 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC28.18■■■□□ 2.1
Tspan18Q80WR1 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
Tspan18Q80WR1 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Tspan18Q80WR1 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Tspan18Q80WR1 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Tspan18Q80WR1 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Tspan18Q80WR1 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Tspan18Q80WR1 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Tspan18Q80WR1 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Tspan18Q80WR1 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Tspan18Q80WR1 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Tspan18Q80WR1 Zfp131-205ENSMUST00000223812 663 ntBASIC28.07■■■□□ 2.08
Tspan18Q80WR1 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC28.06■■■□□ 2.08
Tspan18Q80WR1 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Tspan18Q80WR1 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Tspan18Q80WR1 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Tspan18Q80WR1 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC28.02■■■□□ 2.08
Tspan18Q80WR1 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC28■■■□□ 2.07
Tspan18Q80WR1 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC28■■■□□ 2.07
Tspan18Q80WR1 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Tspan18Q80WR1 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
Tspan18Q80WR1 Gm2415-204ENSMUST00000190235 2004 ntBASIC27.98■■■□□ 2.07
Tspan18Q80WR1 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC27.98■■■□□ 2.07
Tspan18Q80WR1 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Tspan18Q80WR1 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Tspan18Q80WR1 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC27.95■■■□□ 2.06
Tspan18Q80WR1 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
Tspan18Q80WR1 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Tspan18Q80WR1 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC27.92■■■□□ 2.06
Tspan18Q80WR1 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC27.91■■■□□ 2.06
Tspan18Q80WR1 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
Tspan18Q80WR1 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC27.9■■■□□ 2.06
Tspan18Q80WR1 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Tspan18Q80WR1 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC27.86■■■□□ 2.05
Tspan18Q80WR1 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC27.85■■■□□ 2.05
Tspan18Q80WR1 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Tspan18Q80WR1 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC27.85■■■□□ 2.05
Tspan18Q80WR1 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC27.84■■■□□ 2.05
Tspan18Q80WR1 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC27.83■■■□□ 2.05
Tspan18Q80WR1 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC27.82■■■□□ 2.04
Tspan18Q80WR1 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Tspan18Q80WR1 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC27.82■■■□□ 2.04
Tspan18Q80WR1 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Tspan18Q80WR1 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Tspan18Q80WR1 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC27.79■■■□□ 2.04
Tspan18Q80WR1 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC27.78■■■□□ 2.04
Tspan18Q80WR1 Gm6658-202ENSMUST00000209493 1885 ntBASIC27.78■■■□□ 2.04
Tspan18Q80WR1 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Tspan18Q80WR1 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Tspan18Q80WR1 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
Tspan18Q80WR1 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Tspan18Q80WR1 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC27.76■■■□□ 2.03
Tspan18Q80WR1 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC27.75■■■□□ 2.03
Tspan18Q80WR1 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
Tspan18Q80WR1 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC27.73■■■□□ 2.03
Tspan18Q80WR1 Tdp2-203ENSMUST00000223804 1136 ntBASIC27.73■■■□□ 2.03
Tspan18Q80WR1 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC27.72■■■□□ 2.03
Tspan18Q80WR1 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC27.72■■■□□ 2.03
Tspan18Q80WR1 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Tspan18Q80WR1 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
Tspan18Q80WR1 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Tspan18Q80WR1 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC27.68■■■□□ 2.02
Tspan18Q80WR1 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC27.67■■■□□ 2.02
Tspan18Q80WR1 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC27.66■■■□□ 2.02
Tspan18Q80WR1 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC27.66■■■□□ 2.02
Tspan18Q80WR1 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC27.66■■■□□ 2.02
Tspan18Q80WR1 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Tspan18Q80WR1 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
Tspan18Q80WR1 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC27.63■■■□□ 2.01
Tspan18Q80WR1 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC27.62■■■□□ 2.01
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms