Protein–RNA interactions for Protein: Q5NC48

Gm12253, Predicted gene 12253, mousemouse

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12253Q5NC48 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Gm12253Q5NC48 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
Gm12253Q5NC48 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Gm12253Q5NC48 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC22.68■■□□□ 1.22
Gm12253Q5NC48 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Gm12253Q5NC48 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Gm12253Q5NC48 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Gm12253Q5NC48 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Gm12253Q5NC48 Gm16148-201ENSMUST00000119653 893 ntBASIC22.64■■□□□ 1.21
Gm12253Q5NC48 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC22.63■■□□□ 1.21
Gm12253Q5NC48 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Gm12253Q5NC48 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Gm12253Q5NC48 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Gm12253Q5NC48 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Gm12253Q5NC48 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Gm12253Q5NC48 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Gm12253Q5NC48 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Gm12253Q5NC48 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Gm12253Q5NC48 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
Gm12253Q5NC48 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Gm12253Q5NC48 Peli2-204ENSMUST00000226513 1320 ntBASIC22.58■■□□□ 1.21
Gm12253Q5NC48 Mipep-204ENSMUST00000225043 1548 ntBASIC22.58■■□□□ 1.21
Gm12253Q5NC48 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC22.58■■□□□ 1.2
Gm12253Q5NC48 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Gm12253Q5NC48 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Gm12253Q5NC48 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Gm12253Q5NC48 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22.52■■□□□ 1.2
Gm12253Q5NC48 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Gm12253Q5NC48 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Gm12253Q5NC48 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Gm12253Q5NC48 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Gm12253Q5NC48 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Gm12253Q5NC48 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Gm12253Q5NC48 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Gm12253Q5NC48 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Gm12253Q5NC48 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Gm12253Q5NC48 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC22.41■■□□□ 1.18
Gm12253Q5NC48 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Gm12253Q5NC48 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Gm12253Q5NC48 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Gm12253Q5NC48 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Gm12253Q5NC48 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Gm12253Q5NC48 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Gm12253Q5NC48 Tdp2-203ENSMUST00000223804 1136 ntBASIC22.37■■□□□ 1.17
Gm12253Q5NC48 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Gm12253Q5NC48 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Gm12253Q5NC48 Gm2415-204ENSMUST00000190235 2004 ntBASIC22.36■■□□□ 1.17
Gm12253Q5NC48 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC22.35■■□□□ 1.17
Gm12253Q5NC48 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Gm12253Q5NC48 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Gm12253Q5NC48 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC22.34■■□□□ 1.17
Gm12253Q5NC48 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Gm12253Q5NC48 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC22.33■■□□□ 1.17
Gm12253Q5NC48 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Gm12253Q5NC48 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.32■■□□□ 1.16
Gm12253Q5NC48 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Gm12253Q5NC48 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Gm12253Q5NC48 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC22.31■■□□□ 1.16
Gm12253Q5NC48 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC22.28■■□□□ 1.16
Gm12253Q5NC48 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Gm12253Q5NC48 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Gm12253Q5NC48 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC22.26■■□□□ 1.15
Gm12253Q5NC48 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Gm12253Q5NC48 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Gm12253Q5NC48 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Gm12253Q5NC48 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Gm12253Q5NC48 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Gm12253Q5NC48 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Gm12253Q5NC48 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Gm12253Q5NC48 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Gm12253Q5NC48 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC22.16■■□□□ 1.14
Gm12253Q5NC48 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.16■■□□□ 1.14
Gm12253Q5NC48 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Gm12253Q5NC48 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC22.15■■□□□ 1.14
Gm12253Q5NC48 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.15■■□□□ 1.14
Gm12253Q5NC48 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
Gm12253Q5NC48 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Gm12253Q5NC48 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Gm12253Q5NC48 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Gm12253Q5NC48 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Gm12253Q5NC48 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC22.11■■□□□ 1.13
Gm12253Q5NC48 Gm45855-201ENSMUST00000212546 880 ntBASIC22.11■■□□□ 1.13
Gm12253Q5NC48 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC22.09■■□□□ 1.13
Gm12253Q5NC48 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Gm12253Q5NC48 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Gm12253Q5NC48 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Gm12253Q5NC48 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Gm12253Q5NC48 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.04■■□□□ 1.12
Gm12253Q5NC48 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC22.03■■□□□ 1.12
Gm12253Q5NC48 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Gm12253Q5NC48 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Gm12253Q5NC48 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Gm12253Q5NC48 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.11
Gm12253Q5NC48 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Gm12253Q5NC48 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Gm12253Q5NC48 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Gm12253Q5NC48 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Gm12253Q5NC48 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC22■■□□□ 1.11
Gm12253Q5NC48 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Gm12253Q5NC48 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms