Protein–RNA interactions for Protein: Q3URY0

Rtl4, Retrotransposon Gag-like protein 4, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl4Q3URY0 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Rtl4Q3URY0 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.01■□□□□ 0.95
Rtl4Q3URY0 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rtl4Q3URY0 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rtl4Q3URY0 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rtl4Q3URY0 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rtl4Q3URY0 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rtl4Q3URY0 Mipep-204ENSMUST00000225043 1548 ntBASIC20.95■□□□□ 0.94
Rtl4Q3URY0 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.95■□□□□ 0.94
Rtl4Q3URY0 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rtl4Q3URY0 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
Rtl4Q3URY0 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rtl4Q3URY0 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rtl4Q3URY0 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rtl4Q3URY0 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.93■□□□□ 0.94
Rtl4Q3URY0 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rtl4Q3URY0 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Rtl4Q3URY0 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rtl4Q3URY0 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.89■□□□□ 0.94
Rtl4Q3URY0 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rtl4Q3URY0 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.87■□□□□ 0.93
Rtl4Q3URY0 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Rtl4Q3URY0 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rtl4Q3URY0 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rtl4Q3URY0 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rtl4Q3URY0 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Rtl4Q3URY0 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.82■□□□□ 0.92
Rtl4Q3URY0 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rtl4Q3URY0 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rtl4Q3URY0 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rtl4Q3URY0 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Rtl4Q3URY0 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.76■□□□□ 0.91
Rtl4Q3URY0 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rtl4Q3URY0 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rtl4Q3URY0 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rtl4Q3URY0 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rtl4Q3URY0 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rtl4Q3URY0 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rtl4Q3URY0 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rtl4Q3URY0 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rtl4Q3URY0 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.72■□□□□ 0.91
Rtl4Q3URY0 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rtl4Q3URY0 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rtl4Q3URY0 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rtl4Q3URY0 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rtl4Q3URY0 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rtl4Q3URY0 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rtl4Q3URY0 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rtl4Q3URY0 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rtl4Q3URY0 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
Rtl4Q3URY0 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rtl4Q3URY0 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rtl4Q3URY0 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rtl4Q3URY0 Gm26115-201ENSMUST00000175605 87 ntBASIC20.67■□□□□ 0.9
Rtl4Q3URY0 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rtl4Q3URY0 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Rtl4Q3URY0 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rtl4Q3URY0 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rtl4Q3URY0 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rtl4Q3URY0 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Rtl4Q3URY0 Zxda-201ENSMUST00000117281 2621 ntBASIC20.62■□□□□ 0.89
Rtl4Q3URY0 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.61■□□□□ 0.89
Rtl4Q3URY0 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rtl4Q3URY0 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.59■□□□□ 0.89
Rtl4Q3URY0 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Rtl4Q3URY0 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Rtl4Q3URY0 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
Rtl4Q3URY0 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.57■□□□□ 0.88
Rtl4Q3URY0 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rtl4Q3URY0 Gm27322-201ENSMUST00000184007 104 ntBASIC20.57■□□□□ 0.88
Rtl4Q3URY0 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Rtl4Q3URY0 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rtl4Q3URY0 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rtl4Q3URY0 Gm8109-201ENSMUST00000194076 746 ntBASIC20.55■□□□□ 0.88
Rtl4Q3URY0 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rtl4Q3URY0 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.52■□□□□ 0.88
Rtl4Q3URY0 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rtl4Q3URY0 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rtl4Q3URY0 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Rtl4Q3URY0 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.49■□□□□ 0.87
Rtl4Q3URY0 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Rtl4Q3URY0 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.49■□□□□ 0.87
Rtl4Q3URY0 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rtl4Q3URY0 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.48■□□□□ 0.87
Rtl4Q3URY0 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rtl4Q3URY0 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rtl4Q3URY0 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rtl4Q3URY0 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rtl4Q3URY0 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtl4Q3URY0 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rtl4Q3URY0 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20.44■□□□□ 0.86
Rtl4Q3URY0 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rtl4Q3URY0 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rtl4Q3URY0 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rtl4Q3URY0 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rtl4Q3URY0 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.42■□□□□ 0.86
Rtl4Q3URY0 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rtl4Q3URY0 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rtl4Q3URY0 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Rtl4Q3URY0 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 123.9 ms