Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Hist1h1dP43277 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Hist1h1dP43277 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Hist1h1dP43277 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Hist1h1dP43277 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC22.03■■□□□ 1.12
Hist1h1dP43277 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Hist1h1dP43277 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Hist1h1dP43277 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Hist1h1dP43277 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Hist1h1dP43277 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
Hist1h1dP43277 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Hist1h1dP43277 Mipep-204ENSMUST00000225043 1548 ntBASIC21.97■■□□□ 1.11
Hist1h1dP43277 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Hist1h1dP43277 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.96■■□□□ 1.11
Hist1h1dP43277 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Hist1h1dP43277 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Hist1h1dP43277 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Hist1h1dP43277 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Hist1h1dP43277 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Hist1h1dP43277 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.92■■□□□ 1.1
Hist1h1dP43277 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Hist1h1dP43277 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Hist1h1dP43277 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Hist1h1dP43277 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.87■■□□□ 1.09
Hist1h1dP43277 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Hist1h1dP43277 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Hist1h1dP43277 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Hist1h1dP43277 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Hist1h1dP43277 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Hist1h1dP43277 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hist1h1dP43277 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Hist1h1dP43277 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Hist1h1dP43277 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Hist1h1dP43277 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Hist1h1dP43277 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.8■■□□□ 1.08
Hist1h1dP43277 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.8■■□□□ 1.08
Hist1h1dP43277 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Hist1h1dP43277 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Hist1h1dP43277 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Hist1h1dP43277 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Hist1h1dP43277 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Hist1h1dP43277 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Hist1h1dP43277 Zxda-201ENSMUST00000117281 2621 ntBASIC21.76■■□□□ 1.07
Hist1h1dP43277 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Hist1h1dP43277 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Hist1h1dP43277 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Hist1h1dP43277 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Hist1h1dP43277 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hist1h1dP43277 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Hist1h1dP43277 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.73■■□□□ 1.07
Hist1h1dP43277 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Hist1h1dP43277 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Hist1h1dP43277 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
Hist1h1dP43277 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Hist1h1dP43277 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Hist1h1dP43277 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Hist1h1dP43277 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
Hist1h1dP43277 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.64■■□□□ 1.05
Hist1h1dP43277 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Hist1h1dP43277 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.63■■□□□ 1.05
Hist1h1dP43277 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Hist1h1dP43277 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Hist1h1dP43277 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Hist1h1dP43277 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Hist1h1dP43277 Gm25262-201ENSMUST00000174934 133 ntBASIC21.58■■□□□ 1.05
Hist1h1dP43277 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Hist1h1dP43277 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Hist1h1dP43277 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Hist1h1dP43277 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Hist1h1dP43277 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Hist1h1dP43277 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.53■■□□□ 1.04
Hist1h1dP43277 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Hist1h1dP43277 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Hist1h1dP43277 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Hist1h1dP43277 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Hist1h1dP43277 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Hist1h1dP43277 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Hist1h1dP43277 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.48■■□□□ 1.03
Hist1h1dP43277 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Hist1h1dP43277 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Hist1h1dP43277 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.48■■□□□ 1.03
Hist1h1dP43277 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Hist1h1dP43277 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Hist1h1dP43277 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Hist1h1dP43277 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Hist1h1dP43277 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.44■■□□□ 1.02
Hist1h1dP43277 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Hist1h1dP43277 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Hist1h1dP43277 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC21.42■■□□□ 1.02
Hist1h1dP43277 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.41■■□□□ 1.02
Hist1h1dP43277 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Hist1h1dP43277 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
Hist1h1dP43277 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Hist1h1dP43277 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Hist1h1dP43277 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Hist1h1dP43277 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hist1h1dP43277 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Hist1h1dP43277 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hist1h1dP43277 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hist1h1dP43277 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms