Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21,61■■□□□ 1,05
Mmp9P41245 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC21,6■■□□□ 1,05
Mmp9P41245 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21,59■■□□□ 1,05
Mmp9P41245 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21,59■■□□□ 1,05
Mmp9P41245 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21,58■■□□□ 1,05
Mmp9P41245 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21,56■■□□□ 1,04
Mmp9P41245 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21,56■■□□□ 1,04
Mmp9P41245 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21,55■■□□□ 1,04
Mmp9P41245 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21,55■■□□□ 1,04
Mmp9P41245 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21,54■■□□□ 1,04
Mmp9P41245 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21,54■■□□□ 1,04
Mmp9P41245 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21,54■■□□□ 1,04
Mmp9P41245 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC21,53■■□□□ 1,04
Mmp9P41245 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21,53■■□□□ 1,04
Mmp9P41245 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21,52■■□□□ 1,04
Mmp9P41245 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21,52■■□□□ 1,04
Mmp9P41245 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21,51■■□□□ 1,03
Mmp9P41245 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21,51■■□□□ 1,03
Mmp9P41245 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21,5■■□□□ 1,03
Mmp9P41245 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21,49■■□□□ 1,03
Mmp9P41245 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC21,49■■□□□ 1,03
Mmp9P41245 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21,49■■□□□ 1,03
Mmp9P41245 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21,48■■□□□ 1,03
Mmp9P41245 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21,47■■□□□ 1,03
Mmp9P41245 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC21,47■■□□□ 1,03
Mmp9P41245 Gm26115-201ENSMUST00000175605 87 ntBASIC21,45■■□□□ 1,02
Mmp9P41245 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21,45■■□□□ 1,02
Mmp9P41245 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21,44■■□□□ 1,02
Mmp9P41245 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21,43■■□□□ 1,02
Mmp9P41245 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21,41■■□□□ 1,02
Mmp9P41245 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21,39■■□□□ 1,02
Mmp9P41245 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21,39■■□□□ 1,02
Mmp9P41245 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21,39■■□□□ 1,02
Mmp9P41245 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21,38■■□□□ 1,01
Mmp9P41245 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21,37■■□□□ 1,01
Mmp9P41245 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21,37■■□□□ 1,01
Mmp9P41245 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC21,36■■□□□ 1,01
Mmp9P41245 Gm43445-201ENSMUST00000198564 2091 ntBASIC21,35■■□□□ 1,01
Mmp9P41245 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC21,35■■□□□ 1,01
Mmp9P41245 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC21,35■■□□□ 1,01
Mmp9P41245 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21,35■■□□□ 1,01
Mmp9P41245 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21,35■■□□□ 1,01
Mmp9P41245 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21,33■■□□□ 1,01
Mmp9P41245 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21,32■■□□□ 1
Mmp9P41245 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21,32■■□□□ 1
Mmp9P41245 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21,31■■□□□ 1
Mmp9P41245 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21,31■■□□□ 1
Mmp9P41245 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21,31■■□□□ 1
Mmp9P41245 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21,31■■□□□ 1
Mmp9P41245 Amer2-203ENSMUST00000225247 2662 ntBASIC21,3■■□□□ 1
Mmp9P41245 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21,3■■□□□ 1
Mmp9P41245 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21,29■■□□□ 1
Mmp9P41245 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC21,28■■□□□ 1
Mmp9P41245 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21,26■□□□□ 0,99
Mmp9P41245 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC21,25■□□□□ 0,99
Mmp9P41245 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21,25■□□□□ 0,99
Mmp9P41245 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21,24■□□□□ 0,99
Mmp9P41245 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21,24■□□□□ 0,99
Mmp9P41245 Gm8109-201ENSMUST00000194076 746 ntBASIC21,24■□□□□ 0,99
Mmp9P41245 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21,24■□□□□ 0,99
Mmp9P41245 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21,23■□□□□ 0,99
Mmp9P41245 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21,22■□□□□ 0,99
Mmp9P41245 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC21,22■□□□□ 0,99
Mmp9P41245 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC21,22■□□□□ 0,99
Mmp9P41245 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC21,21■□□□□ 0,99
Mmp9P41245 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21,21■□□□□ 0,99
Mmp9P41245 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21,21■□□□□ 0,99
Mmp9P41245 Rab21-202ENSMUST00000218831 843 ntBASIC21,2■□□□□ 0,98
Mmp9P41245 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21,19■□□□□ 0,98
Mmp9P41245 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21,17■□□□□ 0,98
Mmp9P41245 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21,17■□□□□ 0,98
Mmp9P41245 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21,17■□□□□ 0,98
Mmp9P41245 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21,14■□□□□ 0,98
Mmp9P41245 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21,13■□□□□ 0,97
Mmp9P41245 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21,13■□□□□ 0,97
Mmp9P41245 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21,13■□□□□ 0,97
Mmp9P41245 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21,13■□□□□ 0,97
Mmp9P41245 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC21,12■□□□□ 0,97
Mmp9P41245 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21,11■□□□□ 0,97
Mmp9P41245 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21,1■□□□□ 0,97
Mmp9P41245 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21,09■□□□□ 0,97
Mmp9P41245 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21,09■□□□□ 0,97
Mmp9P41245 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21,09■□□□□ 0,97
Mmp9P41245 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21,09■□□□□ 0,97
Mmp9P41245 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21,08■□□□□ 0,97
Mmp9P41245 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21,08■□□□□ 0,96
Mmp9P41245 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21,06■□□□□ 0,96
Mmp9P41245 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21,06■□□□□ 0,96
Mmp9P41245 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21,06■□□□□ 0,96
Mmp9P41245 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21,06■□□□□ 0,96
Mmp9P41245 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21,05■□□□□ 0,96
Mmp9P41245 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21,05■□□□□ 0,96
Mmp9P41245 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21,04■□□□□ 0,96
Mmp9P41245 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21,03■□□□□ 0,96
Mmp9P41245 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21,03■□□□□ 0,96
Mmp9P41245 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21,02■□□□□ 0,96
Mmp9P41245 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21,02■□□□□ 0,95
Mmp9P41245 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21,01■□□□□ 0,95
Mmp9P41245 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20,99■□□□□ 0,95
Mmp9P41245 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20,99■□□□□ 0,95
Retrieved 100 of 76,532 protein–RNA pairs in 35,2 ms