Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.16■□□□□ 0.98
Pfdn2O70591 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pfdn2O70591 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pfdn2O70591 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Pfdn2O70591 Rab21-202ENSMUST00000218831 843 ntBASIC21.14■□□□□ 0.97
Pfdn2O70591 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pfdn2O70591 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pfdn2O70591 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pfdn2O70591 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
Pfdn2O70591 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pfdn2O70591 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pfdn2O70591 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pfdn2O70591 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pfdn2O70591 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pfdn2O70591 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pfdn2O70591 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pfdn2O70591 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pfdn2O70591 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.04■□□□□ 0.96
Pfdn2O70591 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pfdn2O70591 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pfdn2O70591 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pfdn2O70591 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pfdn2O70591 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
Pfdn2O70591 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pfdn2O70591 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pfdn2O70591 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC21.01■□□□□ 0.95
Pfdn2O70591 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pfdn2O70591 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pfdn2O70591 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20.99■□□□□ 0.95
Pfdn2O70591 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.99■□□□□ 0.95
Pfdn2O70591 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pfdn2O70591 Zfp131-207ENSMUST00000224946 1783 ntBASIC20.97■□□□□ 0.95
Pfdn2O70591 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Pfdn2O70591 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pfdn2O70591 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pfdn2O70591 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Pfdn2O70591 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pfdn2O70591 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pfdn2O70591 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pfdn2O70591 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pfdn2O70591 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pfdn2O70591 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Pfdn2O70591 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pfdn2O70591 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC20.9■□□□□ 0.94
Pfdn2O70591 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Pfdn2O70591 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pfdn2O70591 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pfdn2O70591 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pfdn2O70591 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.87■□□□□ 0.93
Pfdn2O70591 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pfdn2O70591 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pfdn2O70591 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Pfdn2O70591 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Pfdn2O70591 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.86■□□□□ 0.93
Pfdn2O70591 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pfdn2O70591 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Pfdn2O70591 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pfdn2O70591 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC20.84■□□□□ 0.93
Pfdn2O70591 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Pfdn2O70591 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.82■□□□□ 0.92
Pfdn2O70591 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pfdn2O70591 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Pfdn2O70591 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pfdn2O70591 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Pfdn2O70591 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.8■□□□□ 0.92
Pfdn2O70591 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pfdn2O70591 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pfdn2O70591 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pfdn2O70591 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pfdn2O70591 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Pfdn2O70591 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.76■□□□□ 0.91
Pfdn2O70591 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pfdn2O70591 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pfdn2O70591 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pfdn2O70591 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pfdn2O70591 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pfdn2O70591 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
Pfdn2O70591 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pfdn2O70591 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pfdn2O70591 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pfdn2O70591 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pfdn2O70591 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pfdn2O70591 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.71■□□□□ 0.91
Pfdn2O70591 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pfdn2O70591 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pfdn2O70591 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Pfdn2O70591 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pfdn2O70591 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pfdn2O70591 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pfdn2O70591 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pfdn2O70591 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Pfdn2O70591 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pfdn2O70591 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pfdn2O70591 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pfdn2O70591 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pfdn2O70591 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pfdn2O70591 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pfdn2O70591 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pfdn2O70591 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pfdn2O70591 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms