Protein–RNA interactions for Protein: O70237

Gfi1b, Zinc finger protein Gfi-1b, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfi1bO70237 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Gfi1bO70237 Gm25262-201ENSMUST00000174934 133 ntBASIC21.5■■□□□ 1.03
Gfi1bO70237 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Gfi1bO70237 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Gfi1bO70237 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Gfi1bO70237 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Gfi1bO70237 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.43■■□□□ 1.02
Gfi1bO70237 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC21.42■■□□□ 1.02
Gfi1bO70237 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Gfi1bO70237 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Gfi1bO70237 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Gfi1bO70237 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.4■■□□□ 1.02
Gfi1bO70237 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gfi1bO70237 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gfi1bO70237 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gfi1bO70237 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Gfi1bO70237 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gfi1bO70237 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gfi1bO70237 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gfi1bO70237 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Gfi1bO70237 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21.35■■□□□ 1.01
Gfi1bO70237 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Gfi1bO70237 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gfi1bO70237 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Gfi1bO70237 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gfi1bO70237 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Gfi1bO70237 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.32■■□□□ 1
Gfi1bO70237 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.31■■□□□ 1
Gfi1bO70237 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Gfi1bO70237 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.3■■□□□ 1
Gfi1bO70237 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC21.3■■□□□ 1
Gfi1bO70237 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Gfi1bO70237 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gfi1bO70237 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gfi1bO70237 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Gfi1bO70237 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gfi1bO70237 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gfi1bO70237 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Gfi1bO70237 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.24■□□□□ 0.99
Gfi1bO70237 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gfi1bO70237 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gfi1bO70237 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gfi1bO70237 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gfi1bO70237 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gfi1bO70237 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
Gfi1bO70237 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC21.22■□□□□ 0.99
Gfi1bO70237 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gfi1bO70237 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC21.2■□□□□ 0.98
Gfi1bO70237 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gfi1bO70237 Zfp131-207ENSMUST00000224946 1783 ntBASIC21.19■□□□□ 0.98
Gfi1bO70237 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Gfi1bO70237 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gfi1bO70237 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.17■□□□□ 0.98
Gfi1bO70237 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gfi1bO70237 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Gfi1bO70237 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Gfi1bO70237 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gfi1bO70237 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Gfi1bO70237 Amer2-203ENSMUST00000225247 2662 ntBASIC21.14■□□□□ 0.98
Gfi1bO70237 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Gfi1bO70237 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC21.13■□□□□ 0.97
Gfi1bO70237 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Gfi1bO70237 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Gfi1bO70237 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gfi1bO70237 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gfi1bO70237 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Gfi1bO70237 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Gfi1bO70237 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gfi1bO70237 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Gfi1bO70237 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Gfi1bO70237 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gfi1bO70237 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Gfi1bO70237 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gfi1bO70237 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC21.05■□□□□ 0.96
Gfi1bO70237 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Gfi1bO70237 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gfi1bO70237 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gfi1bO70237 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Gfi1bO70237 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Gfi1bO70237 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Gfi1bO70237 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gfi1bO70237 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.98■□□□□ 0.95
Gfi1bO70237 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Gfi1bO70237 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gfi1bO70237 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gfi1bO70237 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gfi1bO70237 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gfi1bO70237 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gfi1bO70237 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Gfi1bO70237 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.95■□□□□ 0.94
Gfi1bO70237 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Gfi1bO70237 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Gfi1bO70237 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
Gfi1bO70237 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gfi1bO70237 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.92■□□□□ 0.94
Gfi1bO70237 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Gfi1bO70237 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gfi1bO70237 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gfi1bO70237 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gfi1bO70237 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 9.5 ms