Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pde6dO55057 Gm27325-201ENSMUST00000175467 74 ntBASIC20.43■□□□□ 0.86
Pde6dO55057 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.43■□□□□ 0.86
Pde6dO55057 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pde6dO55057 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pde6dO55057 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pde6dO55057 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pde6dO55057 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pde6dO55057 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pde6dO55057 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pde6dO55057 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pde6dO55057 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pde6dO55057 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pde6dO55057 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pde6dO55057 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Pde6dO55057 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pde6dO55057 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pde6dO55057 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pde6dO55057 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pde6dO55057 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pde6dO55057 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.31■□□□□ 0.84
Pde6dO55057 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pde6dO55057 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pde6dO55057 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC20.3■□□□□ 0.84
Pde6dO55057 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
Pde6dO55057 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.29■□□□□ 0.84
Pde6dO55057 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pde6dO55057 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pde6dO55057 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Pde6dO55057 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pde6dO55057 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC20.26■□□□□ 0.83
Pde6dO55057 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pde6dO55057 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.24■□□□□ 0.83
Pde6dO55057 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pde6dO55057 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pde6dO55057 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Pde6dO55057 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Pde6dO55057 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pde6dO55057 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pde6dO55057 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pde6dO55057 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pde6dO55057 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pde6dO55057 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pde6dO55057 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Pde6dO55057 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pde6dO55057 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pde6dO55057 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pde6dO55057 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pde6dO55057 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Pde6dO55057 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pde6dO55057 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Pde6dO55057 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pde6dO55057 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pde6dO55057 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pde6dO55057 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC20.06■□□□□ 0.8
Pde6dO55057 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pde6dO55057 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pde6dO55057 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
Pde6dO55057 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pde6dO55057 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pde6dO55057 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pde6dO55057 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.04■□□□□ 0.8
Pde6dO55057 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pde6dO55057 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pde6dO55057 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Pde6dO55057 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pde6dO55057 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pde6dO55057 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
Pde6dO55057 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pde6dO55057 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pde6dO55057 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Pde6dO55057 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pde6dO55057 Amer2-203ENSMUST00000225247 2662 ntBASIC19.99■□□□□ 0.79
Pde6dO55057 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pde6dO55057 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Pde6dO55057 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pde6dO55057 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Pde6dO55057 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pde6dO55057 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Pde6dO55057 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.93■□□□□ 0.78
Pde6dO55057 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pde6dO55057 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pde6dO55057 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Pde6dO55057 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Pde6dO55057 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.91■□□□□ 0.78
Pde6dO55057 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pde6dO55057 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pde6dO55057 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pde6dO55057 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Pde6dO55057 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
Pde6dO55057 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pde6dO55057 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pde6dO55057 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pde6dO55057 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pde6dO55057 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pde6dO55057 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Pde6dO55057 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Pde6dO55057 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pde6dO55057 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pde6dO55057 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 7.9 ms