Protein–RNA interactions for Protein: O35551

Rabep1, Rab GTPase-binding effector protein 1, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rabep1O35551 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Rabep1O35551 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
Rabep1O35551 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Rabep1O35551 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Rabep1O35551 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Rabep1O35551 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Rabep1O35551 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Rabep1O35551 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC31.52■■■□□ 2.64
Rabep1O35551 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC31.51■■■□□ 2.63
Rabep1O35551 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Rabep1O35551 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC31.46■■■□□ 2.63
Rabep1O35551 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC31.45■■■□□ 2.63
Rabep1O35551 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Rabep1O35551 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC31.43■■■□□ 2.62
Rabep1O35551 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC31.42■■■□□ 2.62
Rabep1O35551 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
Rabep1O35551 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Rabep1O35551 Zxda-201ENSMUST00000117281 2621 ntBASIC31.4■■■□□ 2.62
Rabep1O35551 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Rabep1O35551 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Rabep1O35551 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
Rabep1O35551 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
Rabep1O35551 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Rabep1O35551 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
Rabep1O35551 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Rabep1O35551 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC31.34■■■□□ 2.61
Rabep1O35551 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC31.34■■■□□ 2.61
Rabep1O35551 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
Rabep1O35551 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Rabep1O35551 Mipep-204ENSMUST00000225043 1548 ntBASIC31.29■■■□□ 2.6
Rabep1O35551 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC31.29■■■□□ 2.6
Rabep1O35551 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Rabep1O35551 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Rabep1O35551 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Rabep1O35551 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC31.26■■■□□ 2.59
Rabep1O35551 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Rabep1O35551 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Rabep1O35551 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
Rabep1O35551 Gm43445-201ENSMUST00000198564 2091 ntBASIC31.23■■■□□ 2.59
Rabep1O35551 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
Rabep1O35551 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC31.21■■■□□ 2.59
Rabep1O35551 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
Rabep1O35551 AL845457.1-201ENSMUST00000197244 68 ntBASIC31.19■■■□□ 2.58
Rabep1O35551 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC31.17■■■□□ 2.58
Rabep1O35551 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Rabep1O35551 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Rabep1O35551 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC31.15■■■□□ 2.58
Rabep1O35551 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC31.15■■■□□ 2.58
Rabep1O35551 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Rabep1O35551 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Rabep1O35551 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Rabep1O35551 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC31.14■■■□□ 2.57
Rabep1O35551 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Rabep1O35551 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Rabep1O35551 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Rabep1O35551 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC31.11■■■□□ 2.57
Rabep1O35551 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC31.11■■■□□ 2.57
Rabep1O35551 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC31.11■■■□□ 2.57
Rabep1O35551 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Rabep1O35551 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
Rabep1O35551 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC31.08■■■□□ 2.57
Rabep1O35551 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Rabep1O35551 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC31.07■■■□□ 2.56
Rabep1O35551 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Rabep1O35551 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
Rabep1O35551 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Rabep1O35551 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Rabep1O35551 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
Rabep1O35551 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC30.96■■■□□ 2.55
Rabep1O35551 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC30.95■■■□□ 2.55
Rabep1O35551 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Rabep1O35551 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Rabep1O35551 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.93■■■□□ 2.54
Rabep1O35551 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
Rabep1O35551 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Rabep1O35551 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
Rabep1O35551 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Rabep1O35551 Amer2-203ENSMUST00000225247 2662 ntBASIC30.85■■■□□ 2.53
Rabep1O35551 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
Rabep1O35551 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Rabep1O35551 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Rabep1O35551 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC30.81■■■□□ 2.52
Rabep1O35551 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Rabep1O35551 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
Rabep1O35551 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Rabep1O35551 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC30.78■■■□□ 2.52
Rabep1O35551 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Rabep1O35551 Gm6345-201ENSMUST00000180378 1691 ntBASIC30.73■■■□□ 2.51
Rabep1O35551 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Rabep1O35551 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Rabep1O35551 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Rabep1O35551 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
Rabep1O35551 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC30.7■■■□□ 2.5
Rabep1O35551 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Rabep1O35551 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Rabep1O35551 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
Rabep1O35551 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Rabep1O35551 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Rabep1O35551 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC30.63■■■□□ 2.49
Rabep1O35551 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC30.63■■■□□ 2.49
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms