Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfsf11O35235 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC20.19■□□□□ 0.82
Tnfsf11O35235 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfsf11O35235 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfsf11O35235 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Tnfsf11O35235 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tnfsf11O35235 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tnfsf11O35235 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tnfsf11O35235 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tnfsf11O35235 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Tnfsf11O35235 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tnfsf11O35235 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Tnfsf11O35235 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Tnfsf11O35235 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.14■□□□□ 0.81
Tnfsf11O35235 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC20.14■□□□□ 0.81
Tnfsf11O35235 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tnfsf11O35235 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
Tnfsf11O35235 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.12■□□□□ 0.81
Tnfsf11O35235 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tnfsf11O35235 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Tnfsf11O35235 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Tnfsf11O35235 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tnfsf11O35235 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Tnfsf11O35235 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.05■□□□□ 0.8
Tnfsf11O35235 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tnfsf11O35235 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tnfsf11O35235 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tnfsf11O35235 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tnfsf11O35235 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tnfsf11O35235 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Tnfsf11O35235 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tnfsf11O35235 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
Tnfsf11O35235 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tnfsf11O35235 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tnfsf11O35235 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tnfsf11O35235 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tnfsf11O35235 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tnfsf11O35235 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Tnfsf11O35235 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Tnfsf11O35235 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tnfsf11O35235 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tnfsf11O35235 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tnfsf11O35235 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tnfsf11O35235 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC19.92■□□□□ 0.78
Tnfsf11O35235 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Tnfsf11O35235 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tnfsf11O35235 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
Tnfsf11O35235 Amer2-203ENSMUST00000225247 2662 ntBASIC19.89■□□□□ 0.77
Tnfsf11O35235 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Tnfsf11O35235 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Tnfsf11O35235 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tnfsf11O35235 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tnfsf11O35235 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tnfsf11O35235 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tnfsf11O35235 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Tnfsf11O35235 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC19.86■□□□□ 0.77
Tnfsf11O35235 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Tnfsf11O35235 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tnfsf11O35235 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tnfsf11O35235 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Tnfsf11O35235 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC19.83■□□□□ 0.77
Tnfsf11O35235 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC19.83■□□□□ 0.77
Tnfsf11O35235 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tnfsf11O35235 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC19.8■□□□□ 0.76
Tnfsf11O35235 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tnfsf11O35235 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tnfsf11O35235 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tnfsf11O35235 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tnfsf11O35235 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Tnfsf11O35235 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Tnfsf11O35235 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Tnfsf11O35235 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tnfsf11O35235 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tnfsf11O35235 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.77■□□□□ 0.75
Tnfsf11O35235 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Tnfsf11O35235 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tnfsf11O35235 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
Tnfsf11O35235 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Tnfsf11O35235 Rab21-202ENSMUST00000218831 843 ntBASIC19.76■□□□□ 0.75
Tnfsf11O35235 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Tnfsf11O35235 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Tnfsf11O35235 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfsf11O35235 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Tnfsf11O35235 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.72■□□□□ 0.75
Tnfsf11O35235 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfsf11O35235 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfsf11O35235 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfsf11O35235 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfsf11O35235 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfsf11O35235 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Tnfsf11O35235 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tnfsf11O35235 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tnfsf11O35235 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tnfsf11O35235 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tnfsf11O35235 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tnfsf11O35235 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.67■□□□□ 0.74
Tnfsf11O35235 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.66■□□□□ 0.74
Tnfsf11O35235 Mipep-204ENSMUST00000225043 1548 ntBASIC19.66■□□□□ 0.74
Tnfsf11O35235 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfsf11O35235 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms