Protein–RNA interactions for Protein: J3QNP9

Fam240a, Family with sequence similarity 240 member A, mousemouse

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam240aJ3QNP9 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Fam240aJ3QNP9 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fam240aJ3QNP9 Gm9905-201ENSMUST00000065740 1845 ntBASIC18.61■□□□□ 0.57
Fam240aJ3QNP9 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Fam240aJ3QNP9 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fam240aJ3QNP9 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Fam240aJ3QNP9 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Fam240aJ3QNP9 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC18.6■□□□□ 0.57
Fam240aJ3QNP9 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Fam240aJ3QNP9 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Fam240aJ3QNP9 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC18.59■□□□□ 0.57
Fam240aJ3QNP9 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Fam240aJ3QNP9 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Fam240aJ3QNP9 Gm23366-201ENSMUST00000175022 89 ntBASIC18.56■□□□□ 0.56
Fam240aJ3QNP9 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Fam240aJ3QNP9 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Fam240aJ3QNP9 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC18.55■□□□□ 0.56
Fam240aJ3QNP9 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Fam240aJ3QNP9 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Fam240aJ3QNP9 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.53■□□□□ 0.56
Fam240aJ3QNP9 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Fam240aJ3QNP9 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Fam240aJ3QNP9 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Fam240aJ3QNP9 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Fam240aJ3QNP9 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Fam240aJ3QNP9 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Fam240aJ3QNP9 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Fam240aJ3QNP9 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Fam240aJ3QNP9 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Fam240aJ3QNP9 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Fam240aJ3QNP9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Fam240aJ3QNP9 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Fam240aJ3QNP9 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Fam240aJ3QNP9 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Fam240aJ3QNP9 Gm6206-201ENSMUST00000133472 2199 ntBASIC18.46■□□□□ 0.55
Fam240aJ3QNP9 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Fam240aJ3QNP9 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Fam240aJ3QNP9 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Fam240aJ3QNP9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Fam240aJ3QNP9 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Fam240aJ3QNP9 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Fam240aJ3QNP9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Fam240aJ3QNP9 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Fam240aJ3QNP9 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Fam240aJ3QNP9 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Fam240aJ3QNP9 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Fam240aJ3QNP9 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Fam240aJ3QNP9 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Fam240aJ3QNP9 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Fam240aJ3QNP9 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC18.38■□□□□ 0.53
Fam240aJ3QNP9 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Fam240aJ3QNP9 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Fam240aJ3QNP9 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Fam240aJ3QNP9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Fam240aJ3QNP9 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Fam240aJ3QNP9 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Fam240aJ3QNP9 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Fam240aJ3QNP9 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Fam240aJ3QNP9 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Fam240aJ3QNP9 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Fam240aJ3QNP9 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Fam240aJ3QNP9 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Fam240aJ3QNP9 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Fam240aJ3QNP9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Fam240aJ3QNP9 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Fam240aJ3QNP9 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Fam240aJ3QNP9 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Fam240aJ3QNP9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Fam240aJ3QNP9 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Fam240aJ3QNP9 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Fam240aJ3QNP9 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC18.3■□□□□ 0.52
Fam240aJ3QNP9 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Fam240aJ3QNP9 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Fam240aJ3QNP9 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Fam240aJ3QNP9 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Fam240aJ3QNP9 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Fam240aJ3QNP9 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Fam240aJ3QNP9 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Fam240aJ3QNP9 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Fam240aJ3QNP9 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Fam240aJ3QNP9 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Fam240aJ3QNP9 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
Fam240aJ3QNP9 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
Fam240aJ3QNP9 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Fam240aJ3QNP9 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Fam240aJ3QNP9 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Fam240aJ3QNP9 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Fam240aJ3QNP9 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fam240aJ3QNP9 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Fam240aJ3QNP9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Fam240aJ3QNP9 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Fam240aJ3QNP9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Fam240aJ3QNP9 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Fam240aJ3QNP9 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Fam240aJ3QNP9 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Fam240aJ3QNP9 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Fam240aJ3QNP9 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Fam240aJ3QNP9 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Fam240aJ3QNP9 Gm43445-201ENSMUST00000198564 2091 ntBASIC18.17■□□□□ 0.5
Fam240aJ3QNP9 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms