Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Trav12-1A0N8R1 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trav12-1A0N8R1 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trav12-1A0N8R1 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trav12-1A0N8R1 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trav12-1A0N8R1 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.82■■□□□ 1.08
Trav12-1A0N8R1 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trav12-1A0N8R1 Mipep-204ENSMUST00000225043 1548 ntBASIC21.81■■□□□ 1.08
Trav12-1A0N8R1 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Trav12-1A0N8R1 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trav12-1A0N8R1 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Trav12-1A0N8R1 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Trav12-1A0N8R1 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trav12-1A0N8R1 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trav12-1A0N8R1 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Trav12-1A0N8R1 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.75■■□□□ 1.07
Trav12-1A0N8R1 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trav12-1A0N8R1 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Trav12-1A0N8R1 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trav12-1A0N8R1 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trav12-1A0N8R1 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trav12-1A0N8R1 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trav12-1A0N8R1 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trav12-1A0N8R1 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trav12-1A0N8R1 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trav12-1A0N8R1 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trav12-1A0N8R1 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trav12-1A0N8R1 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trav12-1A0N8R1 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trav12-1A0N8R1 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trav12-1A0N8R1 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.6■■□□□ 1.05
Trav12-1A0N8R1 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Trav12-1A0N8R1 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trav12-1A0N8R1 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.59■■□□□ 1.05
Trav12-1A0N8R1 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Trav12-1A0N8R1 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trav12-1A0N8R1 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trav12-1A0N8R1 Gm25262-201ENSMUST00000174934 133 ntBASIC21.58■■□□□ 1.05
Trav12-1A0N8R1 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Trav12-1A0N8R1 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trav12-1A0N8R1 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trav12-1A0N8R1 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
Trav12-1A0N8R1 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Trav12-1A0N8R1 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Trav12-1A0N8R1 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Trav12-1A0N8R1 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Trav12-1A0N8R1 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.53■■□□□ 1.04
Trav12-1A0N8R1 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
Trav12-1A0N8R1 Zxda-201ENSMUST00000117281 2621 ntBASIC21.51■■□□□ 1.03
Trav12-1A0N8R1 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Trav12-1A0N8R1 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trav12-1A0N8R1 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trav12-1A0N8R1 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.45■■□□□ 1.02
Trav12-1A0N8R1 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trav12-1A0N8R1 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.44■■□□□ 1.02
Trav12-1A0N8R1 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trav12-1A0N8R1 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.43■■□□□ 1.02
Trav12-1A0N8R1 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Trav12-1A0N8R1 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trav12-1A0N8R1 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
Trav12-1A0N8R1 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
Trav12-1A0N8R1 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.39■■□□□ 1.01
Trav12-1A0N8R1 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trav12-1A0N8R1 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC21.39■■□□□ 1.01
Trav12-1A0N8R1 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trav12-1A0N8R1 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trav12-1A0N8R1 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Trav12-1A0N8R1 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.38■■□□□ 1.01
Trav12-1A0N8R1 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trav12-1A0N8R1 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Trav12-1A0N8R1 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Trav12-1A0N8R1 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trav12-1A0N8R1 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.32■■□□□ 1
Trav12-1A0N8R1 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trav12-1A0N8R1 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trav12-1A0N8R1 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
Trav12-1A0N8R1 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Trav12-1A0N8R1 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trav12-1A0N8R1 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.27■■□□□ 1
Trav12-1A0N8R1 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Trav12-1A0N8R1 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trav12-1A0N8R1 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.26■□□□□ 0.99
Trav12-1A0N8R1 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC21.26■□□□□ 0.99
Trav12-1A0N8R1 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trav12-1A0N8R1 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trav12-1A0N8R1 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trav12-1A0N8R1 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Trav12-1A0N8R1 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Trav12-1A0N8R1 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.24■□□□□ 0.99
Trav12-1A0N8R1 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trav12-1A0N8R1 Gm27322-201ENSMUST00000184007 104 ntBASIC21.24■□□□□ 0.99
Trav12-1A0N8R1 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.24■□□□□ 0.99
Trav12-1A0N8R1 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Trav12-1A0N8R1 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trav12-1A0N8R1 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Trav12-1A0N8R1 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trav12-1A0N8R1 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Trav12-1A0N8R1 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Trav12-1A0N8R1 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
Trav12-1A0N8R1 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms