Protein–RNA interactions for Protein: A0A0G2JGB9

Trdv2-1, T cell receptor delta variable 2-1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-1A0A0G2JGB9 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trdv2-1A0A0G2JGB9 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trdv2-1A0A0G2JGB9 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trdv2-1A0A0G2JGB9 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trdv2-1A0A0G2JGB9 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trdv2-1A0A0G2JGB9 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Trdv2-1A0A0G2JGB9 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trdv2-1A0A0G2JGB9 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trdv2-1A0A0G2JGB9 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trdv2-1A0A0G2JGB9 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trdv2-1A0A0G2JGB9 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trdv2-1A0A0G2JGB9 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Trdv2-1A0A0G2JGB9 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trdv2-1A0A0G2JGB9 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trdv2-1A0A0G2JGB9 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trdv2-1A0A0G2JGB9 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trdv2-1A0A0G2JGB9 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trdv2-1A0A0G2JGB9 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trdv2-1A0A0G2JGB9 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trdv2-1A0A0G2JGB9 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trdv2-1A0A0G2JGB9 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trdv2-1A0A0G2JGB9 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trdv2-1A0A0G2JGB9 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Trdv2-1A0A0G2JGB9 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trdv2-1A0A0G2JGB9 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trdv2-1A0A0G2JGB9 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trdv2-1A0A0G2JGB9 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trdv2-1A0A0G2JGB9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Trdv2-1A0A0G2JGB9 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
Trdv2-1A0A0G2JGB9 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trdv2-1A0A0G2JGB9 Gm27325-201ENSMUST00000175467 74 ntBASIC18.72■□□□□ 0.59
Trdv2-1A0A0G2JGB9 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trdv2-1A0A0G2JGB9 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trdv2-1A0A0G2JGB9 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trdv2-1A0A0G2JGB9 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Trdv2-1A0A0G2JGB9 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trdv2-1A0A0G2JGB9 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trdv2-1A0A0G2JGB9 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trdv2-1A0A0G2JGB9 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trdv2-1A0A0G2JGB9 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trdv2-1A0A0G2JGB9 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trdv2-1A0A0G2JGB9 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trdv2-1A0A0G2JGB9 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trdv2-1A0A0G2JGB9 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trdv2-1A0A0G2JGB9 Gm43445-201ENSMUST00000198564 2091 ntBASIC18.65■□□□□ 0.58
Trdv2-1A0A0G2JGB9 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trdv2-1A0A0G2JGB9 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trdv2-1A0A0G2JGB9 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Trdv2-1A0A0G2JGB9 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trdv2-1A0A0G2JGB9 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trdv2-1A0A0G2JGB9 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trdv2-1A0A0G2JGB9 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trdv2-1A0A0G2JGB9 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trdv2-1A0A0G2JGB9 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trdv2-1A0A0G2JGB9 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trdv2-1A0A0G2JGB9 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Trdv2-1A0A0G2JGB9 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Trdv2-1A0A0G2JGB9 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Trdv2-1A0A0G2JGB9 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trdv2-1A0A0G2JGB9 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trdv2-1A0A0G2JGB9 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trdv2-1A0A0G2JGB9 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trdv2-1A0A0G2JGB9 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trdv2-1A0A0G2JGB9 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trdv2-1A0A0G2JGB9 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trdv2-1A0A0G2JGB9 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Trdv2-1A0A0G2JGB9 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trdv2-1A0A0G2JGB9 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trdv2-1A0A0G2JGB9 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trdv2-1A0A0G2JGB9 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Trdv2-1A0A0G2JGB9 Amer2-203ENSMUST00000225247 2662 ntBASIC18.5■□□□□ 0.55
Trdv2-1A0A0G2JGB9 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trdv2-1A0A0G2JGB9 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.5■□□□□ 0.55
Trdv2-1A0A0G2JGB9 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trdv2-1A0A0G2JGB9 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trdv2-1A0A0G2JGB9 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trdv2-1A0A0G2JGB9 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Trdv2-1A0A0G2JGB9 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trdv2-1A0A0G2JGB9 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trdv2-1A0A0G2JGB9 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trdv2-1A0A0G2JGB9 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.46■□□□□ 0.55
Trdv2-1A0A0G2JGB9 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trdv2-1A0A0G2JGB9 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trdv2-1A0A0G2JGB9 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC18.45■□□□□ 0.54
Trdv2-1A0A0G2JGB9 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trdv2-1A0A0G2JGB9 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trdv2-1A0A0G2JGB9 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trdv2-1A0A0G2JGB9 Zfp131-207ENSMUST00000224946 1783 ntBASIC18.43■□□□□ 0.54
Trdv2-1A0A0G2JGB9 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trdv2-1A0A0G2JGB9 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trdv2-1A0A0G2JGB9 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trdv2-1A0A0G2JGB9 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Trdv2-1A0A0G2JGB9 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC18.41■□□□□ 0.54
Trdv2-1A0A0G2JGB9 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Trdv2-1A0A0G2JGB9 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC18.4■□□□□ 0.54
Trdv2-1A0A0G2JGB9 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Trdv2-1A0A0G2JGB9 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trdv2-1A0A0G2JGB9 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC18.39■□□□□ 0.53
Trdv2-1A0A0G2JGB9 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Trdv2-1A0A0G2JGB9 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 7.7 ms