Protein–RNA interactions for Protein: A0A0B4J1I0

Igkv1-110, Immunoglobulin kappa variable 1-110 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-110A0A0B4J1I0 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Igkv1-110A0A0B4J1I0 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Igkv1-110A0A0B4J1I0 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Igkv1-110A0A0B4J1I0 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC16.5■□□□□ 0.23
Igkv1-110A0A0B4J1I0 Gm25262-201ENSMUST00000174934 133 ntBASIC16.5■□□□□ 0.23
Igkv1-110A0A0B4J1I0 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Igkv1-110A0A0B4J1I0 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC16.5■□□□□ 0.23
Igkv1-110A0A0B4J1I0 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv1-110A0A0B4J1I0 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Igkv1-110A0A0B4J1I0 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Igkv1-110A0A0B4J1I0 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv1-110A0A0B4J1I0 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv1-110A0A0B4J1I0 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv1-110A0A0B4J1I0 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv1-110A0A0B4J1I0 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv1-110A0A0B4J1I0 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Igkv1-110A0A0B4J1I0 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv1-110A0A0B4J1I0 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv1-110A0A0B4J1I0 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv1-110A0A0B4J1I0 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC16.41■□□□□ 0.22
Igkv1-110A0A0B4J1I0 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Igkv1-110A0A0B4J1I0 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Igkv1-110A0A0B4J1I0 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Igkv1-110A0A0B4J1I0 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Igkv1-110A0A0B4J1I0 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Igkv1-110A0A0B4J1I0 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Igkv1-110A0A0B4J1I0 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Igkv1-110A0A0B4J1I0 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Igkv1-110A0A0B4J1I0 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Igkv1-110A0A0B4J1I0 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Igkv1-110A0A0B4J1I0 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Igkv1-110A0A0B4J1I0 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Igkv1-110A0A0B4J1I0 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Igkv1-110A0A0B4J1I0 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Igkv1-110A0A0B4J1I0 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Igkv1-110A0A0B4J1I0 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Igkv1-110A0A0B4J1I0 Gm2415-204ENSMUST00000190235 2004 ntBASIC16.28■□□□□ 0.2
Igkv1-110A0A0B4J1I0 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Igkv1-110A0A0B4J1I0 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Igkv1-110A0A0B4J1I0 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Igkv1-110A0A0B4J1I0 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Igkv1-110A0A0B4J1I0 Gm9905-201ENSMUST00000065740 1845 ntBASIC16.27■□□□□ 0.2
Igkv1-110A0A0B4J1I0 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Igkv1-110A0A0B4J1I0 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Igkv1-110A0A0B4J1I0 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Igkv1-110A0A0B4J1I0 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Igkv1-110A0A0B4J1I0 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Igkv1-110A0A0B4J1I0 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Igkv1-110A0A0B4J1I0 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Igkv1-110A0A0B4J1I0 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Igkv1-110A0A0B4J1I0 AL845457.1-201ENSMUST00000197244 68 ntBASIC16.23■□□□□ 0.19
Igkv1-110A0A0B4J1I0 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Igkv1-110A0A0B4J1I0 Gm6206-201ENSMUST00000133472 2199 ntBASIC16.23■□□□□ 0.19
Igkv1-110A0A0B4J1I0 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Igkv1-110A0A0B4J1I0 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Igkv1-110A0A0B4J1I0 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Igkv1-110A0A0B4J1I0 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Igkv1-110A0A0B4J1I0 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Igkv1-110A0A0B4J1I0 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Igkv1-110A0A0B4J1I0 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Igkv1-110A0A0B4J1I0 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC16.19■□□□□ 0.18
Igkv1-110A0A0B4J1I0 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Igkv1-110A0A0B4J1I0 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Igkv1-110A0A0B4J1I0 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Igkv1-110A0A0B4J1I0 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Igkv1-110A0A0B4J1I0 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Igkv1-110A0A0B4J1I0 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Igkv1-110A0A0B4J1I0 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Igkv1-110A0A0B4J1I0 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Igkv1-110A0A0B4J1I0 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv1-110A0A0B4J1I0 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC16.15■□□□□ 0.18
Igkv1-110A0A0B4J1I0 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
Igkv1-110A0A0B4J1I0 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC16.14■□□□□ 0.17
Igkv1-110A0A0B4J1I0 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv1-110A0A0B4J1I0 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv1-110A0A0B4J1I0 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Igkv1-110A0A0B4J1I0 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Igkv1-110A0A0B4J1I0 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Igkv1-110A0A0B4J1I0 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Igkv1-110A0A0B4J1I0 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Igkv1-110A0A0B4J1I0 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC16.12■□□□□ 0.17
Igkv1-110A0A0B4J1I0 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Igkv1-110A0A0B4J1I0 Mipep-204ENSMUST00000225043 1548 ntBASIC16.11■□□□□ 0.17
Igkv1-110A0A0B4J1I0 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC16.1■□□□□ 0.17
Igkv1-110A0A0B4J1I0 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Igkv1-110A0A0B4J1I0 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv1-110A0A0B4J1I0 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC16.1■□□□□ 0.17
Igkv1-110A0A0B4J1I0 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv1-110A0A0B4J1I0 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Igkv1-110A0A0B4J1I0 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Igkv1-110A0A0B4J1I0 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Igkv1-110A0A0B4J1I0 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC16.09■□□□□ 0.17
Igkv1-110A0A0B4J1I0 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Igkv1-110A0A0B4J1I0 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Igkv1-110A0A0B4J1I0 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC16.09■□□□□ 0.17
Igkv1-110A0A0B4J1I0 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Igkv1-110A0A0B4J1I0 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Igkv1-110A0A0B4J1I0 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Igkv1-110A0A0B4J1I0 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Igkv1-110A0A0B4J1I0 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms