Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trbv13-3A0A0B4J1H2 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.42■□□□□ 0.86
Trbv13-3A0A0B4J1H2 Gm27325-201ENSMUST00000175467 74 ntBASIC20.42■□□□□ 0.86
Trbv13-3A0A0B4J1H2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trbv13-3A0A0B4J1H2 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.41■□□□□ 0.86
Trbv13-3A0A0B4J1H2 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trbv13-3A0A0B4J1H2 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trbv13-3A0A0B4J1H2 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.39■□□□□ 0.85
Trbv13-3A0A0B4J1H2 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trbv13-3A0A0B4J1H2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trbv13-3A0A0B4J1H2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trbv13-3A0A0B4J1H2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trbv13-3A0A0B4J1H2 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trbv13-3A0A0B4J1H2 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC20.33■□□□□ 0.85
Trbv13-3A0A0B4J1H2 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trbv13-3A0A0B4J1H2 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trbv13-3A0A0B4J1H2 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trbv13-3A0A0B4J1H2 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trbv13-3A0A0B4J1H2 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Trbv13-3A0A0B4J1H2 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trbv13-3A0A0B4J1H2 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trbv13-3A0A0B4J1H2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC20.27■□□□□ 0.83
Trbv13-3A0A0B4J1H2 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Trbv13-3A0A0B4J1H2 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trbv13-3A0A0B4J1H2 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trbv13-3A0A0B4J1H2 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Trbv13-3A0A0B4J1H2 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trbv13-3A0A0B4J1H2 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trbv13-3A0A0B4J1H2 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Trbv13-3A0A0B4J1H2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trbv13-3A0A0B4J1H2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trbv13-3A0A0B4J1H2 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trbv13-3A0A0B4J1H2 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trbv13-3A0A0B4J1H2 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trbv13-3A0A0B4J1H2 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trbv13-3A0A0B4J1H2 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trbv13-3A0A0B4J1H2 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.17■□□□□ 0.82
Trbv13-3A0A0B4J1H2 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trbv13-3A0A0B4J1H2 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Trbv13-3A0A0B4J1H2 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trbv13-3A0A0B4J1H2 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trbv13-3A0A0B4J1H2 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
Trbv13-3A0A0B4J1H2 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Trbv13-3A0A0B4J1H2 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trbv13-3A0A0B4J1H2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC20.09■□□□□ 0.81
Trbv13-3A0A0B4J1H2 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trbv13-3A0A0B4J1H2 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Trbv13-3A0A0B4J1H2 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Trbv13-3A0A0B4J1H2 Amer2-203ENSMUST00000225247 2662 ntBASIC20.08■□□□□ 0.81
Trbv13-3A0A0B4J1H2 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trbv13-3A0A0B4J1H2 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trbv13-3A0A0B4J1H2 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trbv13-3A0A0B4J1H2 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trbv13-3A0A0B4J1H2 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.03■□□□□ 0.8
Trbv13-3A0A0B4J1H2 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trbv13-3A0A0B4J1H2 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trbv13-3A0A0B4J1H2 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Trbv13-3A0A0B4J1H2 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Trbv13-3A0A0B4J1H2 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Trbv13-3A0A0B4J1H2 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trbv13-3A0A0B4J1H2 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Trbv13-3A0A0B4J1H2 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Trbv13-3A0A0B4J1H2 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trbv13-3A0A0B4J1H2 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Trbv13-3A0A0B4J1H2 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.96■□□□□ 0.79
Trbv13-3A0A0B4J1H2 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.96■□□□□ 0.79
Trbv13-3A0A0B4J1H2 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Trbv13-3A0A0B4J1H2 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.95■□□□□ 0.78
Trbv13-3A0A0B4J1H2 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trbv13-3A0A0B4J1H2 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trbv13-3A0A0B4J1H2 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trbv13-3A0A0B4J1H2 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.95■□□□□ 0.78
Trbv13-3A0A0B4J1H2 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trbv13-3A0A0B4J1H2 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trbv13-3A0A0B4J1H2 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trbv13-3A0A0B4J1H2 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trbv13-3A0A0B4J1H2 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trbv13-3A0A0B4J1H2 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trbv13-3A0A0B4J1H2 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trbv13-3A0A0B4J1H2 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trbv13-3A0A0B4J1H2 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Trbv13-3A0A0B4J1H2 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.89■□□□□ 0.77
Trbv13-3A0A0B4J1H2 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Trbv13-3A0A0B4J1H2 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trbv13-3A0A0B4J1H2 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trbv13-3A0A0B4J1H2 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trbv13-3A0A0B4J1H2 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trbv13-3A0A0B4J1H2 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trbv13-3A0A0B4J1H2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC19.85■□□□□ 0.77
Trbv13-3A0A0B4J1H2 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trbv13-3A0A0B4J1H2 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trbv13-3A0A0B4J1H2 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trbv13-3A0A0B4J1H2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trbv13-3A0A0B4J1H2 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trbv13-3A0A0B4J1H2 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trbv13-3A0A0B4J1H2 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.79■□□□□ 0.76
Trbv13-3A0A0B4J1H2 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trbv13-3A0A0B4J1H2 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Trbv13-3A0A0B4J1H2 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trbv13-3A0A0B4J1H2 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.77■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms