Protein–RNA interactions for Protein: A0A0A6YX66

Ighv1-20, Immunoglobulin heavy variable V1-20 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-20A0A0A6YX66 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21,33■■□□□ 1,01
Ighv1-20A0A0A6YX66 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21,31■■□□□ 1
Ighv1-20A0A0A6YX66 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21,29■■□□□ 1
Ighv1-20A0A0A6YX66 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21,29■■□□□ 1
Ighv1-20A0A0A6YX66 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21,29■■□□□ 1
Ighv1-20A0A0A6YX66 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21,28■■□□□ 1
Ighv1-20A0A0A6YX66 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21,28■■□□□ 1
Ighv1-20A0A0A6YX66 Peli2-204ENSMUST00000226513 1320 ntBASIC21,27■□□□□ 0,99
Ighv1-20A0A0A6YX66 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21,26■□□□□ 0,99
Ighv1-20A0A0A6YX66 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21,26■□□□□ 0,99
Ighv1-20A0A0A6YX66 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21,26■□□□□ 0,99
Ighv1-20A0A0A6YX66 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21,23■□□□□ 0,99
Ighv1-20A0A0A6YX66 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21,23■□□□□ 0,99
Ighv1-20A0A0A6YX66 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21,23■□□□□ 0,99
Ighv1-20A0A0A6YX66 Gm16148-201ENSMUST00000119653 893 ntBASIC21,22■□□□□ 0,99
Ighv1-20A0A0A6YX66 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21,22■□□□□ 0,99
Ighv1-20A0A0A6YX66 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21,21■□□□□ 0,99
Ighv1-20A0A0A6YX66 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC21,2■□□□□ 0,98
Ighv1-20A0A0A6YX66 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21,19■□□□□ 0,98
Ighv1-20A0A0A6YX66 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21,15■□□□□ 0,98
Ighv1-20A0A0A6YX66 Zfp131-205ENSMUST00000223812 663 ntBASIC21,13■□□□□ 0,97
Ighv1-20A0A0A6YX66 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21,13■□□□□ 0,97
Ighv1-20A0A0A6YX66 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21,12■□□□□ 0,97
Ighv1-20A0A0A6YX66 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21,12■□□□□ 0,97
Ighv1-20A0A0A6YX66 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21,11■□□□□ 0,97
Ighv1-20A0A0A6YX66 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21,1■□□□□ 0,97
Ighv1-20A0A0A6YX66 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21,1■□□□□ 0,97
Ighv1-20A0A0A6YX66 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21,09■□□□□ 0,97
Ighv1-20A0A0A6YX66 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21,07■□□□□ 0,96
Ighv1-20A0A0A6YX66 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21,06■□□□□ 0,96
Ighv1-20A0A0A6YX66 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21,05■□□□□ 0,96
Ighv1-20A0A0A6YX66 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21,05■□□□□ 0,96
Ighv1-20A0A0A6YX66 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21,04■□□□□ 0,96
Ighv1-20A0A0A6YX66 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21,03■□□□□ 0,96
Ighv1-20A0A0A6YX66 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21,02■□□□□ 0,96
Ighv1-20A0A0A6YX66 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21,02■□□□□ 0,96
Ighv1-20A0A0A6YX66 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21,02■□□□□ 0,96
Ighv1-20A0A0A6YX66 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21,01■□□□□ 0,95
Ighv1-20A0A0A6YX66 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21■□□□□ 0,95
Ighv1-20A0A0A6YX66 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0,95
Ighv1-20A0A0A6YX66 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20,99■□□□□ 0,95
Ighv1-20A0A0A6YX66 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20,99■□□□□ 0,95
Ighv1-20A0A0A6YX66 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20,98■□□□□ 0,95
Ighv1-20A0A0A6YX66 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20,97■□□□□ 0,95
Ighv1-20A0A0A6YX66 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20,96■□□□□ 0,95
Ighv1-20A0A0A6YX66 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20,96■□□□□ 0,95
Ighv1-20A0A0A6YX66 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20,96■□□□□ 0,95
Ighv1-20A0A0A6YX66 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20,95■□□□□ 0,94
Ighv1-20A0A0A6YX66 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20,95■□□□□ 0,94
Ighv1-20A0A0A6YX66 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20,94■□□□□ 0,94
Ighv1-20A0A0A6YX66 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20,93■□□□□ 0,94
Ighv1-20A0A0A6YX66 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20,93■□□□□ 0,94
Ighv1-20A0A0A6YX66 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20,92■□□□□ 0,94
Ighv1-20A0A0A6YX66 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20,9■□□□□ 0,94
Ighv1-20A0A0A6YX66 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20,9■□□□□ 0,94
Ighv1-20A0A0A6YX66 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20,88■□□□□ 0,93
Ighv1-20A0A0A6YX66 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20,86■□□□□ 0,93
Ighv1-20A0A0A6YX66 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20,85■□□□□ 0,93
Ighv1-20A0A0A6YX66 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20,85■□□□□ 0,93
Ighv1-20A0A0A6YX66 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20,84■□□□□ 0,93
Ighv1-20A0A0A6YX66 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20,83■□□□□ 0,93
Ighv1-20A0A0A6YX66 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20,83■□□□□ 0,93
Ighv1-20A0A0A6YX66 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20,83■□□□□ 0,93
Ighv1-20A0A0A6YX66 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20,83■□□□□ 0,93
Ighv1-20A0A0A6YX66 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20,83■□□□□ 0,93
Ighv1-20A0A0A6YX66 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20,82■□□□□ 0,92
Ighv1-20A0A0A6YX66 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20,82■□□□□ 0,92
Ighv1-20A0A0A6YX66 Tdp2-203ENSMUST00000223804 1136 ntBASIC20,82■□□□□ 0,92
Ighv1-20A0A0A6YX66 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20,82■□□□□ 0,92
Ighv1-20A0A0A6YX66 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20,8■□□□□ 0,92
Ighv1-20A0A0A6YX66 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20,8■□□□□ 0,92
Ighv1-20A0A0A6YX66 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20,79■□□□□ 0,92
Ighv1-20A0A0A6YX66 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20,78■□□□□ 0,92
Ighv1-20A0A0A6YX66 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20,76■□□□□ 0,91
Ighv1-20A0A0A6YX66 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20,75■□□□□ 0,91
Ighv1-20A0A0A6YX66 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20,75■□□□□ 0,91
Ighv1-20A0A0A6YX66 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20,75■□□□□ 0,91
Ighv1-20A0A0A6YX66 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20,75■□□□□ 0,91
Ighv1-20A0A0A6YX66 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20,75■□□□□ 0,91
Ighv1-20A0A0A6YX66 Gm2415-204ENSMUST00000190235 2004 ntBASIC20,75■□□□□ 0,91
Ighv1-20A0A0A6YX66 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20,74■□□□□ 0,91
Ighv1-20A0A0A6YX66 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20,73■□□□□ 0,91
Ighv1-20A0A0A6YX66 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20,73■□□□□ 0,91
Ighv1-20A0A0A6YX66 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20,73■□□□□ 0,91
Ighv1-20A0A0A6YX66 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20,73■□□□□ 0,91
Ighv1-20A0A0A6YX66 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20,71■□□□□ 0,91
Ighv1-20A0A0A6YX66 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20,7■□□□□ 0,9
Ighv1-20A0A0A6YX66 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20,68■□□□□ 0,9
Ighv1-20A0A0A6YX66 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20,66■□□□□ 0,9
Ighv1-20A0A0A6YX66 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20,66■□□□□ 0,9
Ighv1-20A0A0A6YX66 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC20,66■□□□□ 0,9
Ighv1-20A0A0A6YX66 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20,64■□□□□ 0,9
Ighv1-20A0A0A6YX66 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20,64■□□□□ 0,89
Ighv1-20A0A0A6YX66 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20,63■□□□□ 0,89
Ighv1-20A0A0A6YX66 Gm6658-202ENSMUST00000209493 1885 ntBASIC20,63■□□□□ 0,89
Ighv1-20A0A0A6YX66 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20,63■□□□□ 0,89
Ighv1-20A0A0A6YX66 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20,62■□□□□ 0,89
Ighv1-20A0A0A6YX66 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20,62■□□□□ 0,89
Ighv1-20A0A0A6YX66 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20,61■□□□□ 0,89
Ighv1-20A0A0A6YX66 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20,61■□□□□ 0,89
Retrieved 100 of 76,532 protein–RNA pairs in 12,6 ms