Protein–RNA interactions for Protein: A0A087WR49

Scgb2b11, ABPBG11, mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scgb2b11A0A087WR49 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Scgb2b11A0A087WR49 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Scgb2b11A0A087WR49 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Scgb2b11A0A087WR49 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
Scgb2b11A0A087WR49 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.09■■■□□ 2.09
Scgb2b11A0A087WR49 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Scgb2b11A0A087WR49 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC28.08■■■□□ 2.09
Scgb2b11A0A087WR49 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC28.07■■■□□ 2.08
Scgb2b11A0A087WR49 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC28.07■■■□□ 2.08
Scgb2b11A0A087WR49 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Scgb2b11A0A087WR49 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC28.05■■■□□ 2.08
Scgb2b11A0A087WR49 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC28.04■■■□□ 2.08
Scgb2b11A0A087WR49 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC28.02■■■□□ 2.08
Scgb2b11A0A087WR49 Mipep-204ENSMUST00000225043 1548 ntBASIC28.02■■■□□ 2.08
Scgb2b11A0A087WR49 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC28.01■■■□□ 2.07
Scgb2b11A0A087WR49 AL845457.1-201ENSMUST00000197244 68 ntBASIC27.99■■■□□ 2.07
Scgb2b11A0A087WR49 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Scgb2b11A0A087WR49 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Scgb2b11A0A087WR49 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC27.97■■■□□ 2.07
Scgb2b11A0A087WR49 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Scgb2b11A0A087WR49 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Scgb2b11A0A087WR49 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Scgb2b11A0A087WR49 Gm6206-201ENSMUST00000133472 2199 ntBASIC27.95■■■□□ 2.06
Scgb2b11A0A087WR49 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Scgb2b11A0A087WR49 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Scgb2b11A0A087WR49 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
Scgb2b11A0A087WR49 Gm9905-201ENSMUST00000065740 1845 ntBASIC27.92■■■□□ 2.06
Scgb2b11A0A087WR49 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Scgb2b11A0A087WR49 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Scgb2b11A0A087WR49 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Scgb2b11A0A087WR49 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC27.9■■■□□ 2.06
Scgb2b11A0A087WR49 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC27.9■■■□□ 2.06
Scgb2b11A0A087WR49 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Scgb2b11A0A087WR49 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC27.87■■■□□ 2.05
Scgb2b11A0A087WR49 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Scgb2b11A0A087WR49 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Scgb2b11A0A087WR49 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Scgb2b11A0A087WR49 Zxda-201ENSMUST00000117281 2621 ntBASIC27.83■■■□□ 2.05
Scgb2b11A0A087WR49 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC27.83■■■□□ 2.05
Scgb2b11A0A087WR49 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC27.82■■■□□ 2.04
Scgb2b11A0A087WR49 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Scgb2b11A0A087WR49 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Scgb2b11A0A087WR49 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Scgb2b11A0A087WR49 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Scgb2b11A0A087WR49 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Scgb2b11A0A087WR49 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC27.75■■■□□ 2.03
Scgb2b11A0A087WR49 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Scgb2b11A0A087WR49 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC27.74■■■□□ 2.03
Scgb2b11A0A087WR49 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC27.7■■■□□ 2.03
Scgb2b11A0A087WR49 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC27.7■■■□□ 2.02
Scgb2b11A0A087WR49 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC27.69■■■□□ 2.02
Scgb2b11A0A087WR49 Gm43445-201ENSMUST00000198564 2091 ntBASIC27.67■■■□□ 2.02
Scgb2b11A0A087WR49 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Scgb2b11A0A087WR49 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC27.66■■■□□ 2.02
Scgb2b11A0A087WR49 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC27.66■■■□□ 2.02
Scgb2b11A0A087WR49 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC27.66■■■□□ 2.02
Scgb2b11A0A087WR49 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
Scgb2b11A0A087WR49 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
Scgb2b11A0A087WR49 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Scgb2b11A0A087WR49 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Scgb2b11A0A087WR49 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC27.59■■■□□ 2.01
Scgb2b11A0A087WR49 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Scgb2b11A0A087WR49 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Scgb2b11A0A087WR49 Gm25262-201ENSMUST00000174934 133 ntBASIC27.54■■■□□ 2
Scgb2b11A0A087WR49 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Scgb2b11A0A087WR49 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Scgb2b11A0A087WR49 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC27.52■■■□□ 2
Scgb2b11A0A087WR49 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC27.51■■□□□ 1.99
Scgb2b11A0A087WR49 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Scgb2b11A0A087WR49 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Scgb2b11A0A087WR49 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Scgb2b11A0A087WR49 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC27.46■■□□□ 1.99
Scgb2b11A0A087WR49 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC27.45■■□□□ 1.98
Scgb2b11A0A087WR49 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
Scgb2b11A0A087WR49 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Scgb2b11A0A087WR49 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC27.42■■□□□ 1.98
Scgb2b11A0A087WR49 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Scgb2b11A0A087WR49 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Scgb2b11A0A087WR49 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Scgb2b11A0A087WR49 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Scgb2b11A0A087WR49 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Scgb2b11A0A087WR49 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Scgb2b11A0A087WR49 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Scgb2b11A0A087WR49 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Scgb2b11A0A087WR49 Gm6345-201ENSMUST00000180378 1691 ntBASIC27.35■■□□□ 1.97
Scgb2b11A0A087WR49 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Scgb2b11A0A087WR49 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.33■■□□□ 1.97
Scgb2b11A0A087WR49 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
Scgb2b11A0A087WR49 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Scgb2b11A0A087WR49 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Scgb2b11A0A087WR49 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Scgb2b11A0A087WR49 Amer2-203ENSMUST00000225247 2662 ntBASIC27.32■■□□□ 1.96
Scgb2b11A0A087WR49 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
Scgb2b11A0A087WR49 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC27.3■■□□□ 1.96
Scgb2b11A0A087WR49 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Scgb2b11A0A087WR49 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Scgb2b11A0A087WR49 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Scgb2b11A0A087WR49 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Scgb2b11A0A087WR49 AC166822.3-201ENSMUST00000227394 661 ntBASIC27.28■■□□□ 1.96
Scgb2b11A0A087WR49 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms