Protein–RNA interactions for Protein: A0A075B619

Trav14d-3-dv8, MCG142750 (Fragment), mousemouse

Predictions only

Length 120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14d-3-dv8A0A075B619 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav14d-3-dv8A0A075B619 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Trav14d-3-dv8A0A075B619 Gm6206-201ENSMUST00000133472 2199 ntBASIC17.09■□□□□ 0.33
Trav14d-3-dv8A0A075B619 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav14d-3-dv8A0A075B619 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav14d-3-dv8A0A075B619 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav14d-3-dv8A0A075B619 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC17.07■□□□□ 0.32
Trav14d-3-dv8A0A075B619 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Trav14d-3-dv8A0A075B619 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav14d-3-dv8A0A075B619 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav14d-3-dv8A0A075B619 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav14d-3-dv8A0A075B619 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav14d-3-dv8A0A075B619 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav14d-3-dv8A0A075B619 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav14d-3-dv8A0A075B619 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav14d-3-dv8A0A075B619 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav14d-3-dv8A0A075B619 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav14d-3-dv8A0A075B619 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav14d-3-dv8A0A075B619 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
Trav14d-3-dv8A0A075B619 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav14d-3-dv8A0A075B619 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav14d-3-dv8A0A075B619 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trav14d-3-dv8A0A075B619 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav14d-3-dv8A0A075B619 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Trav14d-3-dv8A0A075B619 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav14d-3-dv8A0A075B619 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav14d-3-dv8A0A075B619 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trav14d-3-dv8A0A075B619 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav14d-3-dv8A0A075B619 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Trav14d-3-dv8A0A075B619 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC16.93■□□□□ 0.3
Trav14d-3-dv8A0A075B619 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav14d-3-dv8A0A075B619 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav14d-3-dv8A0A075B619 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
Trav14d-3-dv8A0A075B619 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav14d-3-dv8A0A075B619 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
Trav14d-3-dv8A0A075B619 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav14d-3-dv8A0A075B619 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav14d-3-dv8A0A075B619 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Trav14d-3-dv8A0A075B619 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav14d-3-dv8A0A075B619 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav14d-3-dv8A0A075B619 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav14d-3-dv8A0A075B619 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav14d-3-dv8A0A075B619 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav14d-3-dv8A0A075B619 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav14d-3-dv8A0A075B619 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
Trav14d-3-dv8A0A075B619 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav14d-3-dv8A0A075B619 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav14d-3-dv8A0A075B619 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav14d-3-dv8A0A075B619 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav14d-3-dv8A0A075B619 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.84■□□□□ 0.29
Trav14d-3-dv8A0A075B619 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav14d-3-dv8A0A075B619 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav14d-3-dv8A0A075B619 Gm6658-202ENSMUST00000209493 1885 ntBASIC16.83■□□□□ 0.28
Trav14d-3-dv8A0A075B619 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Trav14d-3-dv8A0A075B619 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav14d-3-dv8A0A075B619 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav14d-3-dv8A0A075B619 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav14d-3-dv8A0A075B619 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav14d-3-dv8A0A075B619 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav14d-3-dv8A0A075B619 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav14d-3-dv8A0A075B619 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav14d-3-dv8A0A075B619 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav14d-3-dv8A0A075B619 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav14d-3-dv8A0A075B619 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC16.78■□□□□ 0.28
Trav14d-3-dv8A0A075B619 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
Trav14d-3-dv8A0A075B619 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav14d-3-dv8A0A075B619 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.77■□□□□ 0.27
Trav14d-3-dv8A0A075B619 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav14d-3-dv8A0A075B619 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav14d-3-dv8A0A075B619 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav14d-3-dv8A0A075B619 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav14d-3-dv8A0A075B619 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav14d-3-dv8A0A075B619 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trav14d-3-dv8A0A075B619 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav14d-3-dv8A0A075B619 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav14d-3-dv8A0A075B619 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Trav14d-3-dv8A0A075B619 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav14d-3-dv8A0A075B619 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC16.72■□□□□ 0.27
Trav14d-3-dv8A0A075B619 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trav14d-3-dv8A0A075B619 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav14d-3-dv8A0A075B619 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC16.7■□□□□ 0.26
Trav14d-3-dv8A0A075B619 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav14d-3-dv8A0A075B619 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav14d-3-dv8A0A075B619 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav14d-3-dv8A0A075B619 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav14d-3-dv8A0A075B619 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav14d-3-dv8A0A075B619 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav14d-3-dv8A0A075B619 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav14d-3-dv8A0A075B619 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav14d-3-dv8A0A075B619 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Trav14d-3-dv8A0A075B619 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav14d-3-dv8A0A075B619 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav14d-3-dv8A0A075B619 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav14d-3-dv8A0A075B619 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav14d-3-dv8A0A075B619 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav14d-3-dv8A0A075B619 Gm43445-201ENSMUST00000198564 2091 ntBASIC16.65■□□□□ 0.26
Trav14d-3-dv8A0A075B619 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trav14d-3-dv8A0A075B619 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav14d-3-dv8A0A075B619 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav14d-3-dv8A0A075B619 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms