Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
CHD8Q9HCK8 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
CHD8Q9HCK8 AC244197.2-201ENST00000370438 655 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CHD8Q9HCK8 GSTA4-201ENST00000370959 793 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CHD8Q9HCK8 SNCG-202ENST00000372017 701 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHD8Q9HCK8 PAGE4-202ENST00000376141 487 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CHD8Q9HCK8 TXN2-204ENST00000416967 1280 ntTSL 2 BASIC12.55□□□□□ -0.4
CHD8Q9HCK8 LINC02151-201ENST00000452629 921 ntTSL 2 BASIC12.55□□□□□ -0.4
CHD8Q9HCK8 AC104123.1-201ENST00000502645 473 ntTSL 5 BASIC12.55□□□□□ -0.4
CHD8Q9HCK8 SLC10A7-208ENST00000511374 869 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CHD8Q9HCK8 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.55□□□□□ -0.4
CHD8Q9HCK8 SORD2P-201ENST00000558556 1069 ntBASIC12.55□□□□□ -0.4
CHD8Q9HCK8 CIRBP-AS1-201ENST00000585832 994 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CHD8Q9HCK8 MIR6880-201ENST00000622851 62 ntBASIC12.55□□□□□ -0.4
CHD8Q9HCK8 AL139035.1-202ENST00000626308 565 ntTSL 4 BASIC12.55□□□□□ -0.4
CHD8Q9HCK8 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC12.55□□□□□ -0.4
CHD8Q9HCK8 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CHD8Q9HCK8 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.55□□□□□ -0.4
CHD8Q9HCK8 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHD8Q9HCK8 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHD8Q9HCK8 POM121L14P-201ENST00000406100 1558 ntBASIC12.55□□□□□ -0.4
CHD8Q9HCK8 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHD8Q9HCK8 EIF4A1-225ENST00000582746 1645 ntTSL 5 BASIC12.54□□□□□ -0.4
CHD8Q9HCK8 AC089987.1-201ENST00000551654 2209 ntBASIC12.54□□□□□ -0.4
CHD8Q9HCK8 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHD8Q9HCK8 ZNF816-201ENST00000270457 582 ntTSL 3 BASIC12.54□□□□□ -0.4
CHD8Q9HCK8 SPACA7-201ENST00000283550 795 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHD8Q9HCK8 PRY-201ENST00000303728 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHD8Q9HCK8 PRY2-201ENST00000303804 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHD8Q9HCK8 PRYP3-201ENST00000343584 1063 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CHD8Q9HCK8 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CHD8Q9HCK8 VTI1BP2-201ENST00000394154 696 ntBASIC12.54□□□□□ -0.4
CHD8Q9HCK8 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
CHD8Q9HCK8 CLDND1-223ENST00000511081 642 ntTSL 2 BASIC12.54□□□□□ -0.4
CHD8Q9HCK8 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CHD8Q9HCK8 AL022313.4-201ENST00000562756 2046 ntBASIC12.54□□□□□ -0.4
CHD8Q9HCK8 AC008686.1-201ENST00000586894 565 ntTSL 5 BASIC12.54□□□□□ -0.4
CHD8Q9HCK8 AC020663.2-201ENST00000592465 720 ntTSL 3 BASIC12.54□□□□□ -0.4
CHD8Q9HCK8 ZNF674-AS1-202ENST00000609887 672 ntTSL 5 BASIC12.54□□□□□ -0.4
CHD8Q9HCK8 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
CHD8Q9HCK8 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC12.54□□□□□ -0.4
CHD8Q9HCK8 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
CHD8Q9HCK8 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
CHD8Q9HCK8 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
CHD8Q9HCK8 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHD8Q9HCK8 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
CHD8Q9HCK8 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHD8Q9HCK8 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC12.54□□□□□ -0.4
CHD8Q9HCK8 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC12.54□□□□□ -0.4
CHD8Q9HCK8 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.54□□□□□ -0.4
CHD8Q9HCK8 IKZF3-211ENST00000394189 1552 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CHD8Q9HCK8 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC12.54□□□□□ -0.4
CHD8Q9HCK8 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHD8Q9HCK8 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.54□□□□□ -0.4
CHD8Q9HCK8 TRAP1-201ENST00000246957 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHD8Q9HCK8 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHD8Q9HCK8 AC004870.4-202ENST00000433337 455 ntTSL 3 BASIC12.54□□□□□ -0.4
CHD8Q9HCK8 AC246680.1-201ENST00000444624 494 ntTSL 3 BASIC12.54□□□□□ -0.4
CHD8Q9HCK8 AC139795.1-201ENST00000499314 838 ntTSL 5 BASIC12.54□□□□□ -0.4
CHD8Q9HCK8 LRP4-AS1-202ENST00000531719 731 ntTSL 4 BASIC12.54□□□□□ -0.4
CHD8Q9HCK8 AC140658.2-201ENST00000566360 348 ntBASIC12.54□□□□□ -0.4
CHD8Q9HCK8 MIR4527HG-201ENST00000586905 675 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CHD8Q9HCK8 AC010524.1-201ENST00000596488 494 ntTSL 3 BASIC12.54□□□□□ -0.4
CHD8Q9HCK8 AC011306.1-201ENST00000606639 1275 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CHD8Q9HCK8 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC12.54□□□□□ -0.4
CHD8Q9HCK8 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHD8Q9HCK8 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC12.54□□□□□ -0.4
CHD8Q9HCK8 MYCNOS-202ENST00000641263 1313 ntBASIC12.54□□□□□ -0.4
CHD8Q9HCK8 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHD8Q9HCK8 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHD8Q9HCK8 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHD8Q9HCK8 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHD8Q9HCK8 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHD8Q9HCK8 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHD8Q9HCK8 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHD8Q9HCK8 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC12.53□□□□□ -0.4
CHD8Q9HCK8 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHD8Q9HCK8 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHD8Q9HCK8 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CHD8Q9HCK8 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CHD8Q9HCK8 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
CHD8Q9HCK8 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CHD8Q9HCK8 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CHD8Q9HCK8 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHD8Q9HCK8 PDCD4-AS1-201ENST00000420367 778 ntTSL 2 BASIC12.53□□□□□ -0.4
CHD8Q9HCK8 AC253536.2-201ENST00000423307 254 ntBASIC12.53□□□□□ -0.4
CHD8Q9HCK8 HUS1-202ENST00000432325 1125 ntTSL 5 BASIC12.53□□□□□ -0.4
CHD8Q9HCK8 AC073472.1-201ENST00000441433 803 ntBASIC12.53□□□□□ -0.4
CHD8Q9HCK8 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.53□□□□□ -0.4
CHD8Q9HCK8 MTND6P9-201ENST00000458075 519 ntBASIC12.53□□□□□ -0.4
CHD8Q9HCK8 RN7SL342P-201ENST00000479616 294 ntBASIC12.53□□□□□ -0.4
CHD8Q9HCK8 AP005264.6-203ENST00000586882 1050 ntTSL 5 BASIC12.53□□□□□ -0.4
CHD8Q9HCK8 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CHD8Q9HCK8 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
CHD8Q9HCK8 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHD8Q9HCK8 LCK-206ENST00000373564 2137 ntTSL 5 BASIC12.53□□□□□ -0.4
CHD8Q9HCK8 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CHD8Q9HCK8 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHD8Q9HCK8 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHD8Q9HCK8 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms