Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC20.23■□□□□ 0.83
CDC42BPAQ5VT25 AC016650.1-201ENST00000502834 708 ntTSL 2 BASIC20.23■□□□□ 0.83
CDC42BPAQ5VT25 AC092284.1-201ENST00000511386 1289 ntBASIC20.23■□□□□ 0.83
CDC42BPAQ5VT25 HAX1-211ENST00000532105 771 ntTSL 3 BASIC20.23■□□□□ 0.83
CDC42BPAQ5VT25 AC018868.2-201ENST00000559655 1259 ntBASIC20.23■□□□□ 0.83
CDC42BPAQ5VT25 TPST2P1-201ENST00000564073 1102 ntBASIC20.23■□□□□ 0.83
CDC42BPAQ5VT25 AC022382.1-201ENST00000602768 336 ntBASIC20.23■□□□□ 0.83
CDC42BPAQ5VT25 AC090950.1-202ENST00000605733 644 ntBASIC20.23■□□□□ 0.83
CDC42BPAQ5VT25 AC022001.3-201ENST00000606330 596 ntBASIC20.23■□□□□ 0.83
CDC42BPAQ5VT25 OR3A1-202ENST00000615105 966 ntBASIC20.23■□□□□ 0.83
CDC42BPAQ5VT25 AL117379.1-201ENST00000619319 677 ntBASIC20.23■□□□□ 0.83
CDC42BPAQ5VT25 RPS9-213ENST00000626547 476 ntTSL 2 BASIC20.23■□□□□ 0.83
CDC42BPAQ5VT25 AL139220.2-222ENST00000627999 756 ntTSL 5 BASIC20.23■□□□□ 0.83
CDC42BPAQ5VT25 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDC42BPAQ5VT25 GMPR2-205ENST00000456667 1484 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDC42BPAQ5VT25 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDC42BPAQ5VT25 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC20.23■□□□□ 0.83
CDC42BPAQ5VT25 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDC42BPAQ5VT25 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDC42BPAQ5VT25 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDC42BPAQ5VT25 AC097474.1-201ENST00000506481 1371 ntBASIC20.23■□□□□ 0.83
CDC42BPAQ5VT25 ARSG-209ENST00000621439 2599 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CDC42BPAQ5VT25 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDC42BPAQ5VT25 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC20.22■□□□□ 0.83
CDC42BPAQ5VT25 TEPP-201ENST00000290871 1079 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDC42BPAQ5VT25 BTF3-202ENST00000380591 1237 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDC42BPAQ5VT25 POU5F1-202ENST00000441888 1055 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDC42BPAQ5VT25 SOX2-OT-203ENST00000466034 926 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDC42BPAQ5VT25 TEX38-204ENST00000564373 637 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDC42BPAQ5VT25 HNRNPA1P11-201ENST00000580106 956 ntBASIC20.22■□□□□ 0.83
CDC42BPAQ5VT25 SOX2-OT-221ENST00000594942 675 ntTSL 5 BASIC20.22■□□□□ 0.83
CDC42BPAQ5VT25 NCLP1-201ENST00000445357 1963 ntBASIC20.22■□□□□ 0.83
CDC42BPAQ5VT25 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDC42BPAQ5VT25 DHRS12-202ENST00000280056 1324 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDC42BPAQ5VT25 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDC42BPAQ5VT25 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CDC42BPAQ5VT25 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDC42BPAQ5VT25 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDC42BPAQ5VT25 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDC42BPAQ5VT25 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDC42BPAQ5VT25 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CDC42BPAQ5VT25 KIAA0391-211ENST00000605870 1406 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDC42BPAQ5VT25 DTX2P1-201ENST00000425797 1633 ntBASIC20.22■□□□□ 0.83
CDC42BPAQ5VT25 ABCD1P2-201ENST00000429313 1601 ntBASIC20.22■□□□□ 0.83
CDC42BPAQ5VT25 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDC42BPAQ5VT25 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CDC42BPAQ5VT25 VKORC1-203ENST00000354895 901 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDC42BPAQ5VT25 KHDC1L-201ENST00000370388 635 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDC42BPAQ5VT25 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDC42BPAQ5VT25 GSG1L2-201ENST00000399363 882 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CDC42BPAQ5VT25 GSTM2P1-201ENST00000405166 654 ntBASIC20.22■□□□□ 0.83
CDC42BPAQ5VT25 CYP4F29P-202ENST00000428301 1279 ntTSL 2 BASIC20.22■□□□□ 0.83
CDC42BPAQ5VT25 TMEM256P1-201ENST00000430550 340 ntBASIC20.22■□□□□ 0.83
CDC42BPAQ5VT25 RAI1-AS1-201ENST00000443696 724 ntTSL 5 BASIC20.22■□□□□ 0.83
CDC42BPAQ5VT25 FAM213AP2-201ENST00000521579 683 ntBASIC20.22■□□□□ 0.83
CDC42BPAQ5VT25 AC126177.4-201ENST00000547452 731 ntTSL 5 BASIC20.22■□□□□ 0.83
CDC42BPAQ5VT25 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC20.22■□□□□ 0.83
CDC42BPAQ5VT25 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC20.22■□□□□ 0.83
CDC42BPAQ5VT25 AC092634.5-206ENST00000593670 812 ntTSL 5 BASIC20.22■□□□□ 0.83
CDC42BPAQ5VT25 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC20.22■□□□□ 0.83
CDC42BPAQ5VT25 BX510359.7-201ENST00000619819 630 ntBASIC20.22■□□□□ 0.83
CDC42BPAQ5VT25 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC20.22■□□□□ 0.83
CDC42BPAQ5VT25 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC20.21■□□□□ 0.83
CDC42BPAQ5VT25 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDC42BPAQ5VT25 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDC42BPAQ5VT25 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDC42BPAQ5VT25 IP6K2-211ENST00000432678 1309 ntTSL 2 BASIC20.21■□□□□ 0.83
CDC42BPAQ5VT25 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC20.21■□□□□ 0.83
CDC42BPAQ5VT25 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDC42BPAQ5VT25 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDC42BPAQ5VT25 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDC42BPAQ5VT25 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDC42BPAQ5VT25 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDC42BPAQ5VT25 ZNF726-204ENST00000531821 1798 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDC42BPAQ5VT25 DDX19B-208ENST00000563392 1760 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDC42BPAQ5VT25 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CDC42BPAQ5VT25 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CDC42BPAQ5VT25 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CDC42BPAQ5VT25 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDC42BPAQ5VT25 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CDC42BPAQ5VT25 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDC42BPAQ5VT25 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.21■□□□□ 0.83
CDC42BPAQ5VT25 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CDC42BPAQ5VT25 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CDC42BPAQ5VT25 OLAH-203ENST00000378228 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDC42BPAQ5VT25 PNLIP-201ENST00000369221 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDC42BPAQ5VT25 BX088651.4-202ENST00000428895 1479 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDC42BPAQ5VT25 PCP2-201ENST00000311069 776 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDC42BPAQ5VT25 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC20.21■□□□□ 0.83
CDC42BPAQ5VT25 FDPS-206ENST00000467076 1178 ntAPPRIS ALT1 TSL 3 BASIC20.21■□□□□ 0.83
CDC42BPAQ5VT25 RPL30P11-202ENST00000509114 358 ntTSL 3 BASIC20.21■□□□□ 0.83
CDC42BPAQ5VT25 AC104117.4-201ENST00000521486 847 ntBASIC20.21■□□□□ 0.83
CDC42BPAQ5VT25 LINC02427-202ENST00000605270 1059 ntTSL 2 BASIC20.21■□□□□ 0.83
CDC42BPAQ5VT25 AC254633.1-201ENST00000606790 345 ntBASIC20.21■□□□□ 0.83
CDC42BPAQ5VT25 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC20.21■□□□□ 0.83
CDC42BPAQ5VT25 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDC42BPAQ5VT25 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CDC42BPAQ5VT25 FKBP4P1-201ENST00000507284 1347 ntBASIC20.21■□□□□ 0.83
CDC42BPAQ5VT25 OXGR1-204ENST00000543457 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDC42BPAQ5VT25 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms