Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 METTL7AP1-201ENST00000547343 496 ntBASIC16.21■□□□□ 0.19
RHBDL3P58872 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
RHBDL3P58872 KRT8P34-201ENST00000577607 1044 ntBASIC16.21■□□□□ 0.19
RHBDL3P58872 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC16.21■□□□□ 0.19
RHBDL3P58872 EIF5AP2-201ENST00000585668 1047 ntBASIC16.21■□□□□ 0.19
RHBDL3P58872 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC16.21■□□□□ 0.19
RHBDL3P58872 NAV1-210ENST00000593583 726 ntBASIC16.21■□□□□ 0.19
RHBDL3P58872 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC16.21■□□□□ 0.19
RHBDL3P58872 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RHBDL3P58872 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC16.21■□□□□ 0.19
RHBDL3P58872 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC16.21■□□□□ 0.19
RHBDL3P58872 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RHBDL3P58872 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RHBDL3P58872 MARK2P9-201ENST00000430958 1727 ntBASIC16.21■□□□□ 0.19
RHBDL3P58872 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC16.21■□□□□ 0.19
RHBDL3P58872 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RHBDL3P58872 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RHBDL3P58872 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RHBDL3P58872 MANEA-AS1-201ENST00000564541 2268 ntBASIC16.21■□□□□ 0.19
RHBDL3P58872 KRT8P25-201ENST00000473150 1456 ntBASIC16.21■□□□□ 0.19
RHBDL3P58872 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RHBDL3P58872 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RHBDL3P58872 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
RHBDL3P58872 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
RHBDL3P58872 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.21■□□□□ 0.18
RHBDL3P58872 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RHBDL3P58872 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC16.21■□□□□ 0.18
RHBDL3P58872 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
RHBDL3P58872 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
RHBDL3P58872 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC16.21■□□□□ 0.18
RHBDL3P58872 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
RHBDL3P58872 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RHBDL3P58872 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RHBDL3P58872 AC020931.1-201ENST00000589622 1346 ntBASIC16.2■□□□□ 0.18
RHBDL3P58872 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC16.2■□□□□ 0.18
RHBDL3P58872 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC16.2■□□□□ 0.18
RHBDL3P58872 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RHBDL3P58872 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RHBDL3P58872 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RHBDL3P58872 AC011474.4-201ENST00000623523 2076 ntBASIC16.2■□□□□ 0.18
RHBDL3P58872 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RHBDL3P58872 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RHBDL3P58872 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
RHBDL3P58872 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
RHBDL3P58872 STK3-218ENST00000617590 2485 ntTSL 5 BASIC16.2■□□□□ 0.18
RHBDL3P58872 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
RHBDL3P58872 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RHBDL3P58872 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RHBDL3P58872 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC16.2■□□□□ 0.18
RHBDL3P58872 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RHBDL3P58872 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC16.2■□□□□ 0.18
RHBDL3P58872 FAU-202ENST00000434372 533 ntTSL 2 BASIC16.2■□□□□ 0.18
RHBDL3P58872 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC16.2■□□□□ 0.18
RHBDL3P58872 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC16.2■□□□□ 0.18
RHBDL3P58872 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC16.2■□□□□ 0.18
RHBDL3P58872 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
RHBDL3P58872 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC16.2■□□□□ 0.18
RHBDL3P58872 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC16.2■□□□□ 0.18
RHBDL3P58872 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RHBDL3P58872 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RHBDL3P58872 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC16.2■□□□□ 0.18
RHBDL3P58872 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC16.2■□□□□ 0.18
RHBDL3P58872 STK16-202ENST00000409260 1493 ntTSL 5 BASIC16.2■□□□□ 0.18
RHBDL3P58872 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RHBDL3P58872 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RHBDL3P58872 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
RHBDL3P58872 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RHBDL3P58872 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RHBDL3P58872 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC16.2■□□□□ 0.18
RHBDL3P58872 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
RHBDL3P58872 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RHBDL3P58872 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RHBDL3P58872 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RHBDL3P58872 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC16.2■□□□□ 0.18
RHBDL3P58872 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC16.2■□□□□ 0.18
RHBDL3P58872 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC16.2■□□□□ 0.18
RHBDL3P58872 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RHBDL3P58872 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RHBDL3P58872 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RHBDL3P58872 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RHBDL3P58872 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RHBDL3P58872 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RHBDL3P58872 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
RHBDL3P58872 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RHBDL3P58872 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
RHBDL3P58872 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC16.19■□□□□ 0.18
RHBDL3P58872 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC16.19■□□□□ 0.18
RHBDL3P58872 PTN-202ENST00000393083 1599 ntTSL 5 BASIC16.19■□□□□ 0.18
RHBDL3P58872 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RHBDL3P58872 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RHBDL3P58872 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RHBDL3P58872 AF274858.1-201ENST00000406288 372 ntBASIC16.19■□□□□ 0.18
RHBDL3P58872 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC16.19■□□□□ 0.18
RHBDL3P58872 CD37-203ENST00000426897 1204 ntTSL 2 BASIC16.19■□□□□ 0.18
RHBDL3P58872 AC010086.2-201ENST00000428616 226 ntBASIC16.19■□□□□ 0.18
RHBDL3P58872 NDUFB2P1-201ENST00000506966 295 ntBASIC16.19■□□□□ 0.18
RHBDL3P58872 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RHBDL3P58872 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC16.19■□□□□ 0.18
RHBDL3P58872 JPT2-214ENST00000569765 782 ntTSL 2 BASIC16.19■□□□□ 0.18
RHBDL3P58872 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms