Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 PPY2P-201ENST00000582808 702 ntBASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 BX088702.1-201ENST00000610784 235 ntBASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 AC008687.7-202ENST00000637404 953 ntBASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 FBF1-210ENST00000592193 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 TOLLIP-207ENST00000527886 3666 ntTSL 2 BASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 DUSP22-211ENST00000604971 3824 ntTSL 2 BASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 POTEI-203ENST00000631234 2072 ntTSL 2 BASIC12.97□□□□□ -0.33
TMEM53Q6P2H8 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM53Q6P2H8 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM53Q6P2H8 NUP62-208ENST00000596217 3590 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
TMEM53Q6P2H8 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
TMEM53Q6P2H8 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM53Q6P2H8 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM53Q6P2H8 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.96□□□□□ -0.33
TMEM53Q6P2H8 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM53Q6P2H8 GPR55-205ENST00000622008 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM53Q6P2H8 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM53Q6P2H8 AKAP8-201ENST00000269701 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM53Q6P2H8 PM20D1-201ENST00000367136 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM53Q6P2H8 INE2-201ENST00000630399 1874 ntBASIC12.96□□□□□ -0.33
TMEM53Q6P2H8 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM53Q6P2H8 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM53Q6P2H8 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM53Q6P2H8 SIAE-201ENST00000263593 5583 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM53Q6P2H8 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM53Q6P2H8 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM53Q6P2H8 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM53Q6P2H8 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC12.96□□□□□ -0.33
TMEM53Q6P2H8 MIR658-201ENST00000385210 100 ntBASIC12.96□□□□□ -0.33
TMEM53Q6P2H8 STX1A-203ENST00000395155 783 ntTSL 2 BASIC12.96□□□□□ -0.33
TMEM53Q6P2H8 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM53Q6P2H8 AC026954.1-201ENST00000429771 1293 ntBASIC12.96□□□□□ -0.33
TMEM53Q6P2H8 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC12.96□□□□□ -0.33
TMEM53Q6P2H8 ATP5G2P4-201ENST00000442175 420 ntBASIC12.96□□□□□ -0.33
TMEM53Q6P2H8 TPT1P11-201ENST00000458482 498 ntBASIC12.96□□□□□ -0.33
TMEM53Q6P2H8 PFN2-215ENST00000497148 743 ntTSL 4 BASIC12.96□□□□□ -0.33
TMEM53Q6P2H8 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC12.96□□□□□ -0.33
TMEM53Q6P2H8 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
TMEM53Q6P2H8 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM53Q6P2H8 AC073413.1-201ENST00000603927 732 ntBASIC12.96□□□□□ -0.33
TMEM53Q6P2H8 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM53Q6P2H8 MIR6775-201ENST00000617557 69 ntBASIC12.96□□□□□ -0.33
TMEM53Q6P2H8 WNT11-204ENST00000621122 789 ntTSL 5 BASIC12.96□□□□□ -0.33
TMEM53Q6P2H8 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM53Q6P2H8 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM53Q6P2H8 PLOD3-201ENST00000223127 2920 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TMEM53Q6P2H8 FER1L6-AS1-201ENST00000518567 2315 ntTSL 2 BASIC12.96□□□□□ -0.34
TMEM53Q6P2H8 PSMD2-205ENST00000435761 2574 ntTSL 2 BASIC12.96□□□□□ -0.34
TMEM53Q6P2H8 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TMEM53Q6P2H8 P4HA1-201ENST00000263556 2844 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
TMEM53Q6P2H8 P4HA1-204ENST00000394890 2844 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TMEM53Q6P2H8 PPP1R26P1-201ENST00000474415 3613 ntBASIC12.96□□□□□ -0.34
TMEM53Q6P2H8 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
TMEM53Q6P2H8 KRT8P4-201ENST00000509735 1454 ntBASIC12.96□□□□□ -0.34
TMEM53Q6P2H8 HK3-201ENST00000292432 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TMEM53Q6P2H8 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
TMEM53Q6P2H8 ACIN1-222ENST00000557515 2751 ntTSL 5 BASIC12.96□□□□□ -0.34
TMEM53Q6P2H8 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.34
TMEM53Q6P2H8 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
TMEM53Q6P2H8 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
TMEM53Q6P2H8 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
TMEM53Q6P2H8 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC12.96□□□□□ -0.34
TMEM53Q6P2H8 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TMEM53Q6P2H8 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TMEM53Q6P2H8 TMEM136-202ENST00000375095 4143 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
TMEM53Q6P2H8 AL021155.1-201ENST00000438808 2637 ntBASIC12.95□□□□□ -0.34
TMEM53Q6P2H8 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC12.95□□□□□ -0.34
TMEM53Q6P2H8 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
TMEM53Q6P2H8 LGR6-203ENST00000367278 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TMEM53Q6P2H8 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC12.95□□□□□ -0.34
TMEM53Q6P2H8 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TMEM53Q6P2H8 GNAS-214ENST00000371100 4029 ntTSL 5 BASIC12.95□□□□□ -0.34
TMEM53Q6P2H8 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.95□□□□□ -0.34
TMEM53Q6P2H8 TREH-201ENST00000264029 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TMEM53Q6P2H8 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC12.95□□□□□ -0.34
TMEM53Q6P2H8 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TMEM53Q6P2H8 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TMEM53Q6P2H8 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TMEM53Q6P2H8 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TMEM53Q6P2H8 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TMEM53Q6P2H8 AL354702.1-201ENST00000442006 1960 ntBASIC12.95□□□□□ -0.34
TMEM53Q6P2H8 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TMEM53Q6P2H8 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms