Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LTBRP36941 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.04□□□□□ -0.16
LTBRP36941 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LTBRP36941 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
LTBRP36941 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LTBRP36941 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LTBRP36941 AC012358.2-201ENST00000430010 1434 ntBASIC14.04□□□□□ -0.16
LTBRP36941 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LTBRP36941 IGHE-202ENST00000641420 1485 ntAPPRIS P5 BASIC14.04□□□□□ -0.16
LTBRP36941 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
LTBRP36941 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
LTBRP36941 SUCLG2-203ENST00000492795 1512 ntTSL 2 BASIC14.04□□□□□ -0.16
LTBRP36941 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
LTBRP36941 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC14.04□□□□□ -0.16
LTBRP36941 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LTBRP36941 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LTBRP36941 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LTBRP36941 ZFHX4-AS1-201ENST00000518143 1711 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LTBRP36941 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LTBRP36941 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LTBRP36941 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LTBRP36941 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
LTBRP36941 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
LTBRP36941 SERPINB8P1-201ENST00000401898 377 ntBASIC14.03□□□□□ -0.16
LTBRP36941 AC000078.1-201ENST00000420617 682 ntBASIC14.03□□□□□ -0.16
LTBRP36941 RPL13AP5-201ENST00000439189 612 ntBASIC14.03□□□□□ -0.16
LTBRP36941 SLC22A18AS-202ENST00000526203 664 ntAPPRIS P2 TSL 3 BASIC14.03□□□□□ -0.16
LTBRP36941 AC025265.3-201ENST00000550175 468 ntTSL 3 BASIC14.03□□□□□ -0.16
LTBRP36941 AC136698.1-201ENST00000558110 546 ntTSL 4 BASIC14.03□□□□□ -0.16
LTBRP36941 AC048382.4-201ENST00000559065 546 ntTSL 4 BASIC14.03□□□□□ -0.16
LTBRP36941 AC026583.1-201ENST00000561310 569 ntTSL 4 BASIC14.03□□□□□ -0.16
LTBRP36941 AC005920.4-201ENST00000573301 492 ntTSL 4 BASIC14.03□□□□□ -0.16
LTBRP36941 NAA38-204ENST00000575208 529 ntTSL 3 BASIC14.03□□□□□ -0.16
LTBRP36941 AC100778.4-201ENST00000581232 582 ntTSL 4 BASIC14.03□□□□□ -0.16
LTBRP36941 AC063977.2-201ENST00000601996 421 ntBASIC14.03□□□□□ -0.16
LTBRP36941 AC136475.9-201ENST00000605240 497 ntBASIC14.03□□□□□ -0.16
LTBRP36941 BCAS4-206ENST00000609336 787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LTBRP36941 AC079331.1-201ENST00000623200 1200 ntBASIC14.03□□□□□ -0.16
LTBRP36941 AC005609.1-201ENST00000625195 617 ntTSL 5 BASIC14.03□□□□□ -0.16
LTBRP36941 AC005519.2-201ENST00000554532 1367 ntTSL 4 BASIC14.03□□□□□ -0.16
LTBRP36941 CA6-205ENST00000480186 1493 ntTSL 2 BASIC14.03□□□□□ -0.16
LTBRP36941 SKAP1-208ENST00000584924 1477 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LTBRP36941 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LTBRP36941 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LTBRP36941 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LTBRP36941 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LTBRP36941 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.03□□□□□ -0.16
LTBRP36941 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.03□□□□□ -0.16
LTBRP36941 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LTBRP36941 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LTBRP36941 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC14.03□□□□□ -0.16
LTBRP36941 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LTBRP36941 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LTBRP36941 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LTBRP36941 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
LTBRP36941 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LTBRP36941 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
LTBRP36941 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LTBRP36941 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
LTBRP36941 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LTBRP36941 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LTBRP36941 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LTBRP36941 USP44-202ENST00000393091 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LTBRP36941 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LTBRP36941 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LTBRP36941 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.02□□□□□ -0.16
LTBRP36941 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
LTBRP36941 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.16
LTBRP36941 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
LTBRP36941 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.02□□□□□ -0.16
LTBRP36941 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
LTBRP36941 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LTBRP36941 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.02□□□□□ -0.16
LTBRP36941 AL359878.1-201ENST00000381466 1886 ntTSL 2 BASIC14.02□□□□□ -0.16
LTBRP36941 FAM27E3-201ENST00000418795 1593 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LTBRP36941 LINC02226-201ENST00000501071 1587 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
LTBRP36941 KRT8P24-201ENST00000560290 1559 ntBASIC14.02□□□□□ -0.16
LTBRP36941 GLDC-216ENST00000639639 1559 ntTSL 3 BASIC14.02□□□□□ -0.16
LTBRP36941 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
LTBRP36941 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
LTBRP36941 KIR2DL4-203ENST00000357494 1396 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LTBRP36941 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.02□□□□□ -0.17
LTBRP36941 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.02□□□□□ -0.17
LTBRP36941 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LTBRP36941 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
LTBRP36941 SGCA-202ENST00000344627 1057 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LTBRP36941 PSMA7-202ENST00000370861 773 ntTSL 5 BASIC14.02□□□□□ -0.17
LTBRP36941 TRBV20OR9-2-201ENST00000379435 416 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
LTBRP36941 GAPDHP29-201ENST00000429913 985 ntBASIC14.02□□□□□ -0.17
LTBRP36941 AL022725.1-201ENST00000436283 369 ntTSL 2 BASIC14.02□□□□□ -0.17
LTBRP36941 AC007881.1-201ENST00000437460 187 ntBASIC14.02□□□□□ -0.17
LTBRP36941 Z84721.1-201ENST00000438841 372 ntBASIC14.02□□□□□ -0.17
LTBRP36941 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC14.02□□□□□ -0.17
LTBRP36941 AK2-208ENST00000487289 920 ntTSL 2 BASIC14.02□□□□□ -0.17
LTBRP36941 AL139317.2-201ENST00000556998 158 ntBASIC14.02□□□□□ -0.17
LTBRP36941 AC025219.1-201ENST00000559299 526 ntTSL 4 BASIC14.02□□□□□ -0.17
LTBRP36941 AC093072.1-201ENST00000589196 602 ntTSL 4 BASIC14.02□□□□□ -0.17
LTBRP36941 AC006547.1-209ENST00000596334 996 ntTSL 5 BASIC14.02□□□□□ -0.17
LTBRP36941 PILRB-213ENST00000609309 993 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
LTBRP36941 Metazoa_SRP.47-201ENST00000616942 279 ntBASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms