Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 LINC01297-202ENST00000453395 624 ntTSL 5 BASIC12.6□□□□□ -0.39
CHD8Q9HCK8 GAPDHP76-201ENST00000512278 976 ntBASIC12.6□□□□□ -0.39
CHD8Q9HCK8 AC091564.7-201ENST00000545572 464 ntTSL 3 BASIC12.6□□□□□ -0.39
CHD8Q9HCK8 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC12.6□□□□□ -0.39
CHD8Q9HCK8 B9D1-213ENST00000575403 928 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CHD8Q9HCK8 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHD8Q9HCK8 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
CHD8Q9HCK8 SH3GLB2-206ENST00000417224 1468 ntTSL 5 BASIC12.6□□□□□ -0.39
CHD8Q9HCK8 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC12.6□□□□□ -0.39
CHD8Q9HCK8 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CHD8Q9HCK8 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CHD8Q9HCK8 NFKBIA-208ENST00000557140 1400 ntTSL 5 BASIC12.6□□□□□ -0.39
CHD8Q9HCK8 OLFML1-204ENST00000530135 1620 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CHD8Q9HCK8 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
CHD8Q9HCK8 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHD8Q9HCK8 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CHD8Q9HCK8 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHD8Q9HCK8 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHD8Q9HCK8 SDR16C5-203ENST00000522671 1988 ntTSL 2 BASIC12.6□□□□□ -0.39
CHD8Q9HCK8 AL354704.1-201ENST00000629369 1966 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CHD8Q9HCK8 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHD8Q9HCK8 AC103592.1-201ENST00000394513 664 ntBASIC12.6□□□□□ -0.39
CHD8Q9HCK8 AC010997.1-201ENST00000447646 350 ntBASIC12.6□□□□□ -0.39
CHD8Q9HCK8 AL390726.1-201ENST00000451357 202 ntBASIC12.6□□□□□ -0.39
CHD8Q9HCK8 AC018868.2-201ENST00000559655 1259 ntBASIC12.6□□□□□ -0.39
CHD8Q9HCK8 MAP3K14-205ENST00000617331 1049 ntTSL 5 BASIC12.6□□□□□ -0.39
CHD8Q9HCK8 SRP9-205ENST00000626563 329 ntTSL 5 BASIC12.6□□□□□ -0.39
CHD8Q9HCK8 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHD8Q9HCK8 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHD8Q9HCK8 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHD8Q9HCK8 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CHD8Q9HCK8 ZNF114-201ENST00000315849 2206 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CHD8Q9HCK8 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
CHD8Q9HCK8 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHD8Q9HCK8 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CHD8Q9HCK8 DDC-204ENST00000426377 1700 ntTSL 3 BASIC12.59□□□□□ -0.39
CHD8Q9HCK8 VWA3B-221ENST00000614454 1542 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CHD8Q9HCK8 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHD8Q9HCK8 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHD8Q9HCK8 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHD8Q9HCK8 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHD8Q9HCK8 AL162727.3-201ENST00000635661 2787 ntBASIC12.59□□□□□ -0.39
CHD8Q9HCK8 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHD8Q9HCK8 OR10AA1P-201ENST00000417823 937 ntBASIC12.59□□□□□ -0.39
CHD8Q9HCK8 ACTBP1-201ENST00000417985 1113 ntBASIC12.59□□□□□ -0.39
CHD8Q9HCK8 AL121983.2-204ENST00000430592 448 ntTSL 3 BASIC12.59□□□□□ -0.39
CHD8Q9HCK8 RPL35P1-201ENST00000450819 370 ntBASIC12.59□□□□□ -0.39
CHD8Q9HCK8 AC068620.1-201ENST00000470544 798 ntBASIC12.59□□□□□ -0.39
CHD8Q9HCK8 HNRNPA1P4-201ENST00000509706 756 ntBASIC12.59□□□□□ -0.39
CHD8Q9HCK8 LINC01194-203ENST00000513051 670 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CHD8Q9HCK8 AC110285.1-201ENST00000572077 665 ntTSL 3 BASIC12.59□□□□□ -0.39
CHD8Q9HCK8 AC239859.5-201ENST00000614100 1232 ntBASIC12.59□□□□□ -0.39
CHD8Q9HCK8 AC244097.1-201ENST00000621631 1216 ntBASIC12.59□□□□□ -0.39
CHD8Q9HCK8 ATXN10-212ENST00000640901 1185 ntTSL 5 BASIC12.59□□□□□ -0.39
CHD8Q9HCK8 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CHD8Q9HCK8 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHD8Q9HCK8 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CHD8Q9HCK8 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHD8Q9HCK8 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHD8Q9HCK8 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
CHD8Q9HCK8 AP000925.1-201ENST00000425960 1449 ntBASIC12.59□□□□□ -0.39
CHD8Q9HCK8 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
CHD8Q9HCK8 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHD8Q9HCK8 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CHD8Q9HCK8 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHD8Q9HCK8 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CHD8Q9HCK8 C3orf36-201ENST00000408895 1668 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CHD8Q9HCK8 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHD8Q9HCK8 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CHD8Q9HCK8 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.59□□□□□ -0.39
CHD8Q9HCK8 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CHD8Q9HCK8 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CHD8Q9HCK8 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHD8Q9HCK8 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHD8Q9HCK8 WFDC2-201ENST00000217425 356 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CHD8Q9HCK8 OOEP-201ENST00000370359 478 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHD8Q9HCK8 HSPB11-204ENST00000371378 894 ntTSL 3 BASIC12.59□□□□□ -0.39
CHD8Q9HCK8 CDC23-201ENST00000394884 1079 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CHD8Q9HCK8 CTF2P-201ENST00000412003 604 ntBASIC12.59□□□□□ -0.39
CHD8Q9HCK8 AC016735.1-201ENST00000457457 237 ntTSL 2 BASIC12.59□□□□□ -0.39
CHD8Q9HCK8 FDPS-206ENST00000467076 1178 ntAPPRIS ALT1 TSL 3 BASIC12.59□□□□□ -0.39
CHD8Q9HCK8 RN7SL16P-201ENST00000476316 269 ntBASIC12.59□□□□□ -0.39
CHD8Q9HCK8 MTHFD2P7-201ENST00000483867 983 ntBASIC12.59□□□□□ -0.39
CHD8Q9HCK8 AC253536.5-201ENST00000506097 347 ntBASIC12.59□□□□□ -0.39
CHD8Q9HCK8 AC010615.2-201ENST00000596705 566 ntTSL 4 BASIC12.59□□□□□ -0.39
CHD8Q9HCK8 SARS2-211ENST00000598831 665 ntTSL 5 BASIC12.59□□□□□ -0.39
CHD8Q9HCK8 AL109983.1-201ENST00000603234 646 ntBASIC12.59□□□□□ -0.39
CHD8Q9HCK8 AL512631.1-201ENST00000604086 840 ntBASIC12.59□□□□□ -0.39
CHD8Q9HCK8 MIF4GD-214ENST00000618645 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHD8Q9HCK8 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHD8Q9HCK8 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHD8Q9HCK8 A1BG-AS1-203ENST00000594950 1718 ntTSL 2 BASIC12.59□□□□□ -0.39
CHD8Q9HCK8 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHD8Q9HCK8 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CHD8Q9HCK8 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CHD8Q9HCK8 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC12.58□□□□□ -0.39
CHD8Q9HCK8 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
CHD8Q9HCK8 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC12.58□□□□□ -0.39
CHD8Q9HCK8 AC008894.3-201ENST00000624324 3103 ntBASIC12.58□□□□□ -0.39
CHD8Q9HCK8 NBEAP3-201ENST00000420638 1493 ntBASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms