Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC11.53□□□□□ -0.56
Syne3Q4FZC9 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Syne3Q4FZC9 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Syne3Q4FZC9 Adcy7-204ENSMUST00000171456 5951 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Syne3Q4FZC9 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Syne3Q4FZC9 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC11.53□□□□□ -0.56
Syne3Q4FZC9 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Syne3Q4FZC9 Gm5822-201ENSMUST00000161562 1378 ntBASIC11.53□□□□□ -0.56
Syne3Q4FZC9 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Syne3Q4FZC9 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Syne3Q4FZC9 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Syne3Q4FZC9 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Syne3Q4FZC9 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Syne3Q4FZC9 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Syne3Q4FZC9 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Syne3Q4FZC9 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC11.52□□□□□ -0.56
Syne3Q4FZC9 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Syne3Q4FZC9 Pdgfra-202ENSMUST00000168162 6834 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Syne3Q4FZC9 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Syne3Q4FZC9 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Syne3Q4FZC9 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Syne3Q4FZC9 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Syne3Q4FZC9 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC11.52□□□□□ -0.56
Syne3Q4FZC9 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Syne3Q4FZC9 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Syne3Q4FZC9 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Syne3Q4FZC9 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Syne3Q4FZC9 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Syne3Q4FZC9 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Syne3Q4FZC9 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Syne3Q4FZC9 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Syne3Q4FZC9 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Syne3Q4FZC9 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.57
Syne3Q4FZC9 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC11.52□□□□□ -0.57
Syne3Q4FZC9 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC11.52□□□□□ -0.57
Syne3Q4FZC9 Gm12986-201ENSMUST00000119037 967 ntBASIC11.52□□□□□ -0.57
Syne3Q4FZC9 n-R5s84-201ENSMUST00000122591 109 ntBASIC11.52□□□□□ -0.57
Syne3Q4FZC9 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC11.52□□□□□ -0.57
Syne3Q4FZC9 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC11.52□□□□□ -0.57
Syne3Q4FZC9 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC11.52□□□□□ -0.57
Syne3Q4FZC9 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC11.52□□□□□ -0.57
Syne3Q4FZC9 Gm22442-201ENSMUST00000157256 144 ntBASIC11.52□□□□□ -0.57
Syne3Q4FZC9 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Syne3Q4FZC9 Gm8197-202ENSMUST00000193422 934 ntBASIC11.52□□□□□ -0.57
Syne3Q4FZC9 Gm43667-201ENSMUST00000198616 1095 ntBASIC11.52□□□□□ -0.57
Syne3Q4FZC9 Gm43380-201ENSMUST00000200421 220 ntBASIC11.52□□□□□ -0.57
Syne3Q4FZC9 Gm44545-201ENSMUST00000208262 746 ntBASIC11.52□□□□□ -0.57
Syne3Q4FZC9 Gm45594-201ENSMUST00000211717 241 ntBASIC11.52□□□□□ -0.57
Syne3Q4FZC9 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Syne3Q4FZC9 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Syne3Q4FZC9 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Syne3Q4FZC9 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Syne3Q4FZC9 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC11.52□□□□□ -0.57
Syne3Q4FZC9 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC11.52□□□□□ -0.57
Syne3Q4FZC9 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Syne3Q4FZC9 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Syne3Q4FZC9 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Syne3Q4FZC9 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Syne3Q4FZC9 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Syne3Q4FZC9 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Syne3Q4FZC9 Gm19040-201ENSMUST00000203280 4726 ntBASIC11.52□□□□□ -0.57
Syne3Q4FZC9 Gm5308-201ENSMUST00000196752 1354 ntBASIC11.52□□□□□ -0.57
Syne3Q4FZC9 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Syne3Q4FZC9 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Syne3Q4FZC9 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Syne3Q4FZC9 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Syne3Q4FZC9 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Syne3Q4FZC9 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Syne3Q4FZC9 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC11.51□□□□□ -0.57
Syne3Q4FZC9 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC11.51□□□□□ -0.57
Syne3Q4FZC9 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Syne3Q4FZC9 Gm6024-201ENSMUST00000117850 1558 ntBASIC11.51□□□□□ -0.57
Syne3Q4FZC9 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Syne3Q4FZC9 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Syne3Q4FZC9 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Syne3Q4FZC9 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC11.51□□□□□ -0.57
Syne3Q4FZC9 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Syne3Q4FZC9 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Syne3Q4FZC9 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Syne3Q4FZC9 Snord55-201ENSMUST00000174939 79 ntBASIC11.51□□□□□ -0.57
Syne3Q4FZC9 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC11.51□□□□□ -0.57
Syne3Q4FZC9 Gm19015-201ENSMUST00000184002 1189 ntBASIC11.51□□□□□ -0.57
Syne3Q4FZC9 Gm8531-201ENSMUST00000188319 893 ntBASIC11.51□□□□□ -0.57
Syne3Q4FZC9 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC11.51□□□□□ -0.57
Syne3Q4FZC9 Gm30946-201ENSMUST00000198288 724 ntBASIC11.51□□□□□ -0.57
Syne3Q4FZC9 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Syne3Q4FZC9 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC11.51□□□□□ -0.57
Syne3Q4FZC9 Gm45758-201ENSMUST00000212448 1006 ntBASIC11.51□□□□□ -0.57
Syne3Q4FZC9 Gm9111-201ENSMUST00000219394 709 ntBASIC11.51□□□□□ -0.57
Syne3Q4FZC9 AC129975.1-201ENSMUST00000224816 592 ntBASIC11.51□□□□□ -0.57
Syne3Q4FZC9 Prrxl1-205ENSMUST00000228878 723 ntBASIC11.51□□□□□ -0.57
Syne3Q4FZC9 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Syne3Q4FZC9 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Syne3Q4FZC9 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Syne3Q4FZC9 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Syne3Q4FZC9 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Syne3Q4FZC9 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Syne3Q4FZC9 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Syne3Q4FZC9 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Syne3Q4FZC9 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms