Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBA52P62987 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBA52P62987 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBA52P62987 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBA52P62987 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBA52P62987 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBA52P62987 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBA52P62987 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
UBA52P62987 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
UBA52P62987 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBA52P62987 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
UBA52P62987 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.24□□□□□ -0.45
UBA52P62987 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBA52P62987 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBA52P62987 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
UBA52P62987 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBA52P62987 NDUFAB1P1-201ENST00000404262 460 ntBASIC12.24□□□□□ -0.45
UBA52P62987 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBA52P62987 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC12.24□□□□□ -0.45
UBA52P62987 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC12.24□□□□□ -0.45
UBA52P62987 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.24□□□□□ -0.45
UBA52P62987 AC018735.1-201ENST00000437208 1502 ntBASIC12.24□□□□□ -0.45
UBA52P62987 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC12.24□□□□□ -0.45
UBA52P62987 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC12.24□□□□□ -0.45
UBA52P62987 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBA52P62987 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBA52P62987 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC12.24□□□□□ -0.45
UBA52P62987 AC011840.2-201ENST00000563063 1520 ntBASIC12.24□□□□□ -0.45
UBA52P62987 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.24□□□□□ -0.45
UBA52P62987 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC12.24□□□□□ -0.45
UBA52P62987 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.24□□□□□ -0.45
UBA52P62987 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.24□□□□□ -0.45
UBA52P62987 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBA52P62987 NDUFV2P1-201ENST00000596415 907 ntBASIC12.24□□□□□ -0.45
UBA52P62987 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC12.24□□□□□ -0.45
UBA52P62987 AC025181.2-201ENST00000606994 802 ntBASIC12.24□□□□□ -0.45
UBA52P62987 AL445209.1-201ENST00000607269 3491 ntBASIC12.24□□□□□ -0.45
UBA52P62987 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
UBA52P62987 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
UBA52P62987 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
UBA52P62987 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBA52P62987 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
UBA52P62987 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
UBA52P62987 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBA52P62987 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBA52P62987 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBA52P62987 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBA52P62987 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBA52P62987 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBA52P62987 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
UBA52P62987 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBA52P62987 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UBA52P62987 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
UBA52P62987 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
UBA52P62987 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC12.23□□□□□ -0.45
UBA52P62987 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.23□□□□□ -0.45
UBA52P62987 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBA52P62987 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBA52P62987 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBA52P62987 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBA52P62987 AC134407.3-201ENST00000624035 2139 ntBASIC12.23□□□□□ -0.45
UBA52P62987 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.23□□□□□ -0.45
UBA52P62987 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
UBA52P62987 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
UBA52P62987 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBA52P62987 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBA52P62987 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBA52P62987 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBA52P62987 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBA52P62987 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC12.23□□□□□ -0.45
UBA52P62987 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBA52P62987 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBA52P62987 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBA52P62987 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC12.23□□□□□ -0.45
UBA52P62987 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC12.23□□□□□ -0.45
UBA52P62987 ATP6V0CP2-201ENST00000469409 207 ntBASIC12.23□□□□□ -0.45
UBA52P62987 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
UBA52P62987 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
UBA52P62987 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
UBA52P62987 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC12.23□□□□□ -0.45
UBA52P62987 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC12.23□□□□□ -0.45
UBA52P62987 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBA52P62987 AC105129.2-201ENST00000559536 390 ntBASIC12.23□□□□□ -0.45
UBA52P62987 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC12.23□□□□□ -0.45
UBA52P62987 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC12.23□□□□□ -0.45
UBA52P62987 AL451050.2-201ENST00000606967 682 ntBASIC12.23□□□□□ -0.45
UBA52P62987 AC244157.2-201ENST00000616239 1006 ntBASIC12.23□□□□□ -0.45
UBA52P62987 ENPP7P14-201ENST00000621765 1040 ntBASIC12.23□□□□□ -0.45
UBA52P62987 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC12.23□□□□□ -0.45
UBA52P62987 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
UBA52P62987 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBA52P62987 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBA52P62987 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
UBA52P62987 BX324167.2-201ENST00000623717 3316 ntBASIC12.23□□□□□ -0.45
UBA52P62987 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC12.23□□□□□ -0.45
UBA52P62987 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBA52P62987 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
UBA52P62987 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
UBA52P62987 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBA52P62987 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms