Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
GPC4O75487 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.16□□□□□ -0.14
GPC4O75487 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GPC4O75487 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
GPC4O75487 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
GPC4O75487 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GPC4O75487 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
GPC4O75487 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GPC4O75487 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.16□□□□□ -0.14
GPC4O75487 AC078875.1-201ENST00000431907 724 ntBASIC14.16□□□□□ -0.14
GPC4O75487 NKAIN1P1-201ENST00000435754 582 ntBASIC14.16□□□□□ -0.14
GPC4O75487 AC244107.1-201ENST00000442033 332 ntBASIC14.16□□□□□ -0.14
GPC4O75487 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.16□□□□□ -0.14
GPC4O75487 AC092658.1-201ENST00000505836 891 ntBASIC14.16□□□□□ -0.14
GPC4O75487 AC106794.1-201ENST00000506935 792 ntBASIC14.16□□□□□ -0.14
GPC4O75487 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.16□□□□□ -0.14
GPC4O75487 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.16□□□□□ -0.14
GPC4O75487 AC005740.2-201ENST00000511085 419 ntBASIC14.16□□□□□ -0.14
GPC4O75487 AC009779.1-201ENST00000551138 283 ntBASIC14.16□□□□□ -0.14
GPC4O75487 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.16□□□□□ -0.14
GPC4O75487 RN7SL219P-201ENST00000582872 296 ntBASIC14.16□□□□□ -0.14
GPC4O75487 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GPC4O75487 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC14.16□□□□□ -0.14
GPC4O75487 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.16□□□□□ -0.14
GPC4O75487 AL132994.2-201ENST00000603120 687 ntBASIC14.16□□□□□ -0.14
GPC4O75487 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.16□□□□□ -0.14
GPC4O75487 AL591471.1-201ENST00000621855 229 ntBASIC14.16□□□□□ -0.14
GPC4O75487 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GPC4O75487 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
GPC4O75487 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
GPC4O75487 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GPC4O75487 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GPC4O75487 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GPC4O75487 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
GPC4O75487 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
GPC4O75487 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC14.16□□□□□ -0.14
GPC4O75487 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
GPC4O75487 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
GPC4O75487 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC14.16□□□□□ -0.14
GPC4O75487 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GPC4O75487 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
GPC4O75487 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.16□□□□□ -0.14
GPC4O75487 AL591122.2-201ENST00000624125 1853 ntBASIC14.16□□□□□ -0.14
GPC4O75487 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
GPC4O75487 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GPC4O75487 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GPC4O75487 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
GPC4O75487 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.16□□□□□ -0.14
GPC4O75487 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GPC4O75487 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GPC4O75487 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.15□□□□□ -0.14
GPC4O75487 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.15□□□□□ -0.14
GPC4O75487 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GPC4O75487 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
GPC4O75487 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC14.15□□□□□ -0.14
GPC4O75487 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GPC4O75487 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.15□□□□□ -0.14
GPC4O75487 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC14.15□□□□□ -0.14
GPC4O75487 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GPC4O75487 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC14.15□□□□□ -0.14
GPC4O75487 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
GPC4O75487 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GPC4O75487 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GPC4O75487 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
GPC4O75487 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GPC4O75487 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
GPC4O75487 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
GPC4O75487 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GPC4O75487 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.15□□□□□ -0.14
GPC4O75487 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.15□□□□□ -0.14
GPC4O75487 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.15□□□□□ -0.14
GPC4O75487 AC007274.1-201ENST00000439805 662 ntBASIC14.15□□□□□ -0.14
GPC4O75487 AC006033.1-201ENST00000440505 426 ntBASIC14.15□□□□□ -0.14
GPC4O75487 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GPC4O75487 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
GPC4O75487 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.15□□□□□ -0.14
GPC4O75487 MARK2P5-201ENST00000507649 634 ntBASIC14.15□□□□□ -0.14
GPC4O75487 AC044849.1-201ENST00000519737 1188 ntBASIC14.15□□□□□ -0.14
GPC4O75487 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.15□□□□□ -0.14
GPC4O75487 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.15□□□□□ -0.14
GPC4O75487 AC013355.1-201ENST00000562625 723 ntBASIC14.15□□□□□ -0.14
GPC4O75487 MIR4538-201ENST00000581377 78 ntBASIC14.15□□□□□ -0.14
GPC4O75487 AL022328.3-201ENST00000607943 679 ntBASIC14.15□□□□□ -0.14
GPC4O75487 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.15□□□□□ -0.14
GPC4O75487 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.15□□□□□ -0.14
GPC4O75487 AC092299.1-201ENST00000632679 757 ntBASIC14.15□□□□□ -0.14
GPC4O75487 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.15□□□□□ -0.14
GPC4O75487 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GPC4O75487 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GPC4O75487 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
GPC4O75487 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC14.15□□□□□ -0.14
GPC4O75487 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GPC4O75487 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
GPC4O75487 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.15□□□□□ -0.14
GPC4O75487 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GPC4O75487 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC14.15□□□□□ -0.14
GPC4O75487 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
GPC4O75487 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GPC4O75487 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.15□□□□□ -0.14
GPC4O75487 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms