Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 MMP19-202ENST00000409200 1431 ntTSL 2 BASIC20.15■□□□□ 0.82
SHANK2Q9UPX8 HPGD-204ENST00000504433 1910 ntTSL 2 BASIC20.15■□□□□ 0.82
SHANK2Q9UPX8 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
SHANK2Q9UPX8 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHANK2Q9UPX8 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHANK2Q9UPX8 AC111170.3-201ENST00000624282 2464 ntBASIC20.15■□□□□ 0.82
SHANK2Q9UPX8 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHANK2Q9UPX8 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
SHANK2Q9UPX8 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC20.14■□□□□ 0.82
SHANK2Q9UPX8 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
SHANK2Q9UPX8 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SHANK2Q9UPX8 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC20.14■□□□□ 0.82
SHANK2Q9UPX8 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SHANK2Q9UPX8 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC20.14■□□□□ 0.81
SHANK2Q9UPX8 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SHANK2Q9UPX8 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC20.14■□□□□ 0.81
SHANK2Q9UPX8 AC092910.2-201ENST00000491262 348 ntBASIC20.14■□□□□ 0.81
SHANK2Q9UPX8 PRDM2-213ENST00000503842 705 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SHANK2Q9UPX8 AC090200.1-201ENST00000522918 590 ntTSL 2 BASIC20.14■□□□□ 0.81
SHANK2Q9UPX8 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC20.14■□□□□ 0.81
SHANK2Q9UPX8 AC025259.1-201ENST00000550301 647 ntTSL 3 BASIC20.14■□□□□ 0.81
SHANK2Q9UPX8 AC091132.6-201ENST00000586411 826 ntTSL 5 BASIC20.14■□□□□ 0.81
SHANK2Q9UPX8 TLE2-205ENST00000586422 389 ntTSL 5 BASIC20.14■□□□□ 0.81
SHANK2Q9UPX8 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC20.14■□□□□ 0.81
SHANK2Q9UPX8 LINC01398-202ENST00000634819 1292 ntTSL 5 BASIC20.14■□□□□ 0.81
SHANK2Q9UPX8 AC005865.2-202ENST00000635814 725 ntBASIC20.14■□□□□ 0.81
SHANK2Q9UPX8 AL590094.1-206ENST00000635959 478 ntTSL 5 BASIC20.14■□□□□ 0.81
SHANK2Q9UPX8 AL590094.1-209ENST00000637260 499 ntTSL 5 BASIC20.14■□□□□ 0.81
SHANK2Q9UPX8 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SHANK2Q9UPX8 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC20.14■□□□□ 0.81
SHANK2Q9UPX8 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC20.14■□□□□ 0.81
SHANK2Q9UPX8 Z97653.2-201ENST00000623057 1418 ntBASIC20.14■□□□□ 0.81
SHANK2Q9UPX8 VOPP1-217ENST00000625836 1400 ntTSL 2 BASIC20.14■□□□□ 0.81
SHANK2Q9UPX8 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC20.14■□□□□ 0.81
SHANK2Q9UPX8 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC20.14■□□□□ 0.81
SHANK2Q9UPX8 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SHANK2Q9UPX8 AL359878.1-201ENST00000381466 1886 ntTSL 2 BASIC20.14■□□□□ 0.81
SHANK2Q9UPX8 AC007336.3-201ENST00000623886 2160 ntBASIC20.14■□□□□ 0.81
SHANK2Q9UPX8 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
SHANK2Q9UPX8 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SHANK2Q9UPX8 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC20.14■□□□□ 0.81
SHANK2Q9UPX8 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHANK2Q9UPX8 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
SHANK2Q9UPX8 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHANK2Q9UPX8 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SHANK2Q9UPX8 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.13■□□□□ 0.81
SHANK2Q9UPX8 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
SHANK2Q9UPX8 AC007389.3-201ENST00000420724 1656 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SHANK2Q9UPX8 TBC1D3P1-201ENST00000590047 1693 ntBASIC20.13■□□□□ 0.81
SHANK2Q9UPX8 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC20.13■□□□□ 0.81
SHANK2Q9UPX8 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHANK2Q9UPX8 AL359182.1-201ENST00000435915 469 ntTSL 3 BASIC20.13■□□□□ 0.81
SHANK2Q9UPX8 AC108879.1-201ENST00000438026 828 ntTSL 3 BASIC20.13■□□□□ 0.81
SHANK2Q9UPX8 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC20.13■□□□□ 0.81
SHANK2Q9UPX8 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHANK2Q9UPX8 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC20.13■□□□□ 0.81
SHANK2Q9UPX8 PEBP1P3-201ENST00000455475 548 ntBASIC20.13■□□□□ 0.81
SHANK2Q9UPX8 RN7SL578P-201ENST00000477781 283 ntBASIC20.13■□□□□ 0.81
SHANK2Q9UPX8 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC20.13■□□□□ 0.81
SHANK2Q9UPX8 AC008494.1-201ENST00000497612 796 ntBASIC20.13■□□□□ 0.81
SHANK2Q9UPX8 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHANK2Q9UPX8 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC20.13■□□□□ 0.81
SHANK2Q9UPX8 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC20.13■□□□□ 0.81
SHANK2Q9UPX8 SNX20-205ENST00000610485 557 ntTSL 5 BASIC20.13■□□□□ 0.81
SHANK2Q9UPX8 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC20.13■□□□□ 0.81
SHANK2Q9UPX8 CCDC32-215ENST00000625629 801 ntTSL 5 BASIC20.13■□□□□ 0.81
SHANK2Q9UPX8 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
SHANK2Q9UPX8 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
SHANK2Q9UPX8 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHANK2Q9UPX8 AP000787.1-205ENST00000536683 1485 ntTSL 5 BASIC20.13■□□□□ 0.81
SHANK2Q9UPX8 HORMAD1-202ENST00000361824 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHANK2Q9UPX8 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC20.13■□□□□ 0.81
SHANK2Q9UPX8 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
SHANK2Q9UPX8 AL050341.2-201ENST00000567508 1541 ntBASIC20.13■□□□□ 0.81
SHANK2Q9UPX8 ACKR1-202ENST00000368122 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHANK2Q9UPX8 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHANK2Q9UPX8 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHANK2Q9UPX8 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC20.12■□□□□ 0.81
SHANK2Q9UPX8 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SHANK2Q9UPX8 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC20.12■□□□□ 0.81
SHANK2Q9UPX8 RNA5SP84-201ENST00000364740 107 ntBASIC20.12■□□□□ 0.81
SHANK2Q9UPX8 FOLR1-204ENST00000393681 1061 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SHANK2Q9UPX8 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SHANK2Q9UPX8 RBM14-205ENST00000443702 732 ntTSL 3 BASIC20.12■□□□□ 0.81
SHANK2Q9UPX8 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC20.12■□□□□ 0.81
SHANK2Q9UPX8 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC20.12■□□□□ 0.81
SHANK2Q9UPX8 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC20.12■□□□□ 0.81
SHANK2Q9UPX8 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC20.12■□□□□ 0.81
SHANK2Q9UPX8 SMYD5-209ENST00000629411 246 ntTSL 5 BASIC20.12■□□□□ 0.81
SHANK2Q9UPX8 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SHANK2Q9UPX8 AL137077.2-201ENST00000635124 1608 ntBASIC20.12■□□□□ 0.81
SHANK2Q9UPX8 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SHANK2Q9UPX8 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SHANK2Q9UPX8 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SHANK2Q9UPX8 ARF4-201ENST00000303436 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SHANK2Q9UPX8 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SHANK2Q9UPX8 POM121L4P-202ENST00000427789 1891 ntBASIC20.12■□□□□ 0.81
SHANK2Q9UPX8 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC20.12■□□□□ 0.81
SHANK2Q9UPX8 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
SHANK2Q9UPX8 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms