Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
IFT140Q96RY7 FGD5P1-202ENST00000614866 2498 ntBASIC22.16■■□□□ 1.14
IFT140Q96RY7 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
IFT140Q96RY7 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
IFT140Q96RY7 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
IFT140Q96RY7 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC22.16■■□□□ 1.14
IFT140Q96RY7 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC22.16■■□□□ 1.14
IFT140Q96RY7 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC22.16■■□□□ 1.14
IFT140Q96RY7 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
IFT140Q96RY7 AC099689.1-201ENST00000624383 1302 ntBASIC22.16■■□□□ 1.14
IFT140Q96RY7 AC015802.1-201ENST00000588104 1449 ntBASIC22.16■■□□□ 1.14
IFT140Q96RY7 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
IFT140Q96RY7 PAX6-255ENST00000639386 1723 ntTSL 5 BASIC22.16■■□□□ 1.14
IFT140Q96RY7 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
IFT140Q96RY7 FMR1-218ENST00000621447 1832 ntTSL 3 BASIC22.16■■□□□ 1.14
IFT140Q96RY7 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
IFT140Q96RY7 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
IFT140Q96RY7 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC22.16■■□□□ 1.14
IFT140Q96RY7 FCER1A-201ENST00000368114 765 ntTSL 3 BASIC22.15■■□□□ 1.14
IFT140Q96RY7 TRGV2-201ENST00000426402 544 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
IFT140Q96RY7 MTND6P7-201ENST00000433237 524 ntBASIC22.15■■□□□ 1.14
IFT140Q96RY7 AC114781.1-201ENST00000450559 1028 ntBASIC22.15■■□□□ 1.14
IFT140Q96RY7 ENTPD1-AS1-210ENST00000452942 864 ntTSL 3 BASIC22.15■■□□□ 1.14
IFT140Q96RY7 TPI1P2-201ENST00000491343 752 ntBASIC22.15■■□□□ 1.14
IFT140Q96RY7 C8orf37-AS1-203ENST00000521905 617 ntTSL 5 BASIC22.15■■□□□ 1.14
IFT140Q96RY7 KRTAP2-2-202ENST00000542910 390 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
IFT140Q96RY7 AL391832.3-201ENST00000549744 846 ntTSL 3 BASIC22.15■■□□□ 1.14
IFT140Q96RY7 AC012146.4-201ENST00000575546 271 ntBASIC22.15■■□□□ 1.14
IFT140Q96RY7 TUBB8P5-201ENST00000445286 1351 ntBASIC22.15■■□□□ 1.14
IFT140Q96RY7 KIR2DL4-204ENST00000359085 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
IFT140Q96RY7 PTCD2-207ENST00000503868 1653 ntTSL 2 BASIC22.15■■□□□ 1.14
IFT140Q96RY7 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
IFT140Q96RY7 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC22.15■■□□□ 1.14
IFT140Q96RY7 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
IFT140Q96RY7 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
IFT140Q96RY7 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
IFT140Q96RY7 AC073488.1-201ENST00000416620 1600 ntBASIC22.15■■□□□ 1.14
IFT140Q96RY7 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
IFT140Q96RY7 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
IFT140Q96RY7 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
IFT140Q96RY7 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC22.15■■□□□ 1.14
IFT140Q96RY7 CNOT4-204ENST00000414802 1687 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
IFT140Q96RY7 FAM183BP-201ENST00000409072 1595 ntBASIC22.15■■□□□ 1.14
IFT140Q96RY7 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
IFT140Q96RY7 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
IFT140Q96RY7 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC22.15■■□□□ 1.14
IFT140Q96RY7 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC22.15■■□□□ 1.14
IFT140Q96RY7 SLURP1-201ENST00000246515 537 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
IFT140Q96RY7 APOC2-201ENST00000252490 727 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
IFT140Q96RY7 SYCE1-201ENST00000303903 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
IFT140Q96RY7 PLPP4-201ENST00000369073 1135 ntTSL 5 BASIC22.15■■□□□ 1.14
IFT140Q96RY7 AL133517.1-201ENST00000413412 748 ntBASIC22.15■■□□□ 1.14
IFT140Q96RY7 NDFIP2-AS1-201ENST00000457171 431 ntTSL 3 BASIC22.15■■□□□ 1.14
IFT140Q96RY7 AL512631.1-201ENST00000604086 840 ntBASIC22.15■■□□□ 1.14
IFT140Q96RY7 AC016526.4-201ENST00000636059 517 ntTSL 3 BASIC22.15■■□□□ 1.14
IFT140Q96RY7 ALDOA-229ENST00000636698 420 ntTSL 3 BASIC22.15■■□□□ 1.14
IFT140Q96RY7 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC22.15■■□□□ 1.14
IFT140Q96RY7 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
IFT140Q96RY7 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
IFT140Q96RY7 ALLC-201ENST00000252505 1446 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
IFT140Q96RY7 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
IFT140Q96RY7 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC22.14■■□□□ 1.14
IFT140Q96RY7 AHCYP7-201ENST00000560847 1308 ntBASIC22.14■■□□□ 1.14
IFT140Q96RY7 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.14
IFT140Q96RY7 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
IFT140Q96RY7 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
IFT140Q96RY7 SGCE-201ENST00000265735 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
IFT140Q96RY7 RHOH-219ENST00000614836 2114 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.13
IFT140Q96RY7 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
IFT140Q96RY7 AC025538.1-201ENST00000510707 1486 ntBASIC22.14■■□□□ 1.13
IFT140Q96RY7 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
IFT140Q96RY7 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC22.14■■□□□ 1.13
IFT140Q96RY7 AC023157.3-201ENST00000619086 2088 ntBASIC22.14■■□□□ 1.13
IFT140Q96RY7 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
IFT140Q96RY7 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
IFT140Q96RY7 OR2T34-201ENST00000328782 957 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
IFT140Q96RY7 OR2T3-201ENST00000359594 957 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
IFT140Q96RY7 MYH9-202ENST00000401701 789 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
IFT140Q96RY7 RPS7-202ENST00000403564 764 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
IFT140Q96RY7 AL929472.4-201ENST00000447422 691 ntBASIC22.14■■□□□ 1.13
IFT140Q96RY7 PFN1P10-201ENST00000455962 327 ntBASIC22.14■■□□□ 1.13
IFT140Q96RY7 AL355987.2-201ENST00000471502 561 ntTSL 4 BASIC22.14■■□□□ 1.13
IFT140Q96RY7 SLC10A7-208ENST00000511374 869 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
IFT140Q96RY7 LUCAT1-201ENST00000511918 828 ntTSL 3 BASIC22.14■■□□□ 1.13
IFT140Q96RY7 AC078925.1-201ENST00000535370 568 ntTSL 2 BASIC22.14■■□□□ 1.13
IFT140Q96RY7 AL132780.2-203ENST00000555294 589 ntTSL 4 BASIC22.14■■□□□ 1.13
IFT140Q96RY7 AC011456.1-201ENST00000592270 536 ntTSL 4 BASIC22.14■■□□□ 1.13
IFT140Q96RY7 SARS2-211ENST00000598831 665 ntTSL 5 BASIC22.14■■□□□ 1.13
IFT140Q96RY7 MFSD12-215ENST00000615613 688 ntBASIC22.14■■□□□ 1.13
IFT140Q96RY7 WASH5P-206ENST00000632506 1147 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
IFT140Q96RY7 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
IFT140Q96RY7 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
IFT140Q96RY7 NPL-205ENST00000367555 1536 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
IFT140Q96RY7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
IFT140Q96RY7 GUCY1A3-213ENST00000621234 1788 ntTSL 5 BASIC22.14■■□□□ 1.13
IFT140Q96RY7 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC22.14■■□□□ 1.13
IFT140Q96RY7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
IFT140Q96RY7 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
IFT140Q96RY7 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC22.13■■□□□ 1.13
IFT140Q96RY7 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms