Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 HNRNPA1P3-201ENST00000440968 551 ntBASIC11.6□□□□□ -0.55
CCDC168Q8NDH2 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC11.6□□□□□ -0.55
CCDC168Q8NDH2 FAM223B-202ENST00000598177 713 ntBASIC11.6□□□□□ -0.55
CCDC168Q8NDH2 FAM69A-204ENST00000615519 865 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CCDC168Q8NDH2 FAM223A-202ENST00000625204 713 ntBASIC11.6□□□□□ -0.55
CCDC168Q8NDH2 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
CCDC168Q8NDH2 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CCDC168Q8NDH2 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
CCDC168Q8NDH2 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC11.6□□□□□ -0.55
CCDC168Q8NDH2 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CCDC168Q8NDH2 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
CCDC168Q8NDH2 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC11.6□□□□□ -0.55
CCDC168Q8NDH2 MX1-218ENST00000619682 1980 ntTSL 5 BASIC11.6□□□□□ -0.55
CCDC168Q8NDH2 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
CCDC168Q8NDH2 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CCDC168Q8NDH2 CRCT1-201ENST00000368790 700 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CCDC168Q8NDH2 AL512328.1-203ENST00000428480 673 ntTSL 5 BASIC11.6□□□□□ -0.55
CCDC168Q8NDH2 AL161932.2-201ENST00000435436 679 ntBASIC11.6□□□□□ -0.55
CCDC168Q8NDH2 PLAC9P1-203ENST00000440031 223 ntBASIC11.6□□□□□ -0.55
CCDC168Q8NDH2 AC015818.1-201ENST00000451011 244 ntBASIC11.6□□□□□ -0.55
CCDC168Q8NDH2 ROPN1L-AS1-201ENST00000513037 189 ntTSL 2 BASIC11.6□□□□□ -0.55
CCDC168Q8NDH2 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC11.6□□□□□ -0.55
CCDC168Q8NDH2 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
CCDC168Q8NDH2 AC136475.7-201ENST00000602949 592 ntBASIC11.6□□□□□ -0.55
CCDC168Q8NDH2 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CCDC168Q8NDH2 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC11.6□□□□□ -0.55
CCDC168Q8NDH2 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CCDC168Q8NDH2 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CCDC168Q8NDH2 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 DUT-208ENST00000559540 1441 ntTSL 2 BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 AL031577.1-201ENST00000339867 399 ntBASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 PDPN-208ENST00000509009 571 ntTSL 4 BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 CRYAB-213ENST00000533475 1119 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 AC025265.3-201ENST00000550175 468 ntTSL 3 BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 AL139317.2-201ENST00000556998 158 ntBASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 C12orf45-205ENST00000622317 1078 ntTSL 5 BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 PAX6-247ENST00000638965 979 ntTSL 5 BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 MEX3B-202ENST00000558133 4333 ntBASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 AC099398.1-201ENST00000567919 2776 ntBASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 VKORC1-203ENST00000354895 901 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 NANOS3-202ENST00000397555 769 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 AC246787.2-202ENST00000418566 370 ntTSL 3 BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 TUBB8P9-201ENST00000422534 1276 ntBASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 TUBB8P10-201ENST00000430210 1279 ntBASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 IDI2-AS1-204ENST00000437374 896 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 GULOP-201ENST00000454030 748 ntBASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 KRT18P42-201ENST00000505048 1255 ntBASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 AC022784.6-202ENST00000523246 674 ntTSL 5 BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 CD276-217ENST00000564751 951 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 AC048380.1-201ENST00000589818 465 ntTSL 3 BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 BX510359.7-201ENST00000619819 630 ntBASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 GABARAPL1-219ENST00000629504 379 ntTSL 4 BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 PPP1R26P2-201ENST00000611403 3595 ntBASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CCDC168Q8NDH2 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
CCDC168Q8NDH2 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
CCDC168Q8NDH2 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
CCDC168Q8NDH2 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CCDC168Q8NDH2 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
CCDC168Q8NDH2 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CCDC168Q8NDH2 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
CCDC168Q8NDH2 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC11.58□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms