Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
TMEM53Q6P2H8 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TMEM53Q6P2H8 PACSIN1-207ENST00000620693 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TMEM53Q6P2H8 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TMEM53Q6P2H8 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TMEM53Q6P2H8 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
TMEM53Q6P2H8 NPR2-201ENST00000342694 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TMEM53Q6P2H8 DHX30-206ENST00000446256 3660 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.33
TMEM53Q6P2H8 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC13.02□□□□□ -0.33
TMEM53Q6P2H8 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.02□□□□□ -0.33
TMEM53Q6P2H8 RN7SKP230-201ENST00000365642 335 ntBASIC13.02□□□□□ -0.33
TMEM53Q6P2H8 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TMEM53Q6P2H8 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
TMEM53Q6P2H8 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC13.02□□□□□ -0.33
TMEM53Q6P2H8 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.02□□□□□ -0.33
TMEM53Q6P2H8 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.02□□□□□ -0.33
TMEM53Q6P2H8 COX5BP1-201ENST00000507622 393 ntBASIC13.02□□□□□ -0.33
TMEM53Q6P2H8 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.02□□□□□ -0.33
TMEM53Q6P2H8 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.02□□□□□ -0.33
TMEM53Q6P2H8 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.02□□□□□ -0.33
TMEM53Q6P2H8 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.02□□□□□ -0.33
TMEM53Q6P2H8 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TMEM53Q6P2H8 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.02□□□□□ -0.33
TMEM53Q6P2H8 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.02□□□□□ -0.33
TMEM53Q6P2H8 SYNRG-229ENST00000621136 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TMEM53Q6P2H8 MRPL37P1-201ENST00000592451 1337 ntBASIC13.02□□□□□ -0.33
TMEM53Q6P2H8 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TMEM53Q6P2H8 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.02□□□□□ -0.33
TMEM53Q6P2H8 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
TMEM53Q6P2H8 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC13.02□□□□□ -0.33
TMEM53Q6P2H8 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.02□□□□□ -0.33
TMEM53Q6P2H8 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TMEM53Q6P2H8 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TMEM53Q6P2H8 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TMEM53Q6P2H8 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TMEM53Q6P2H8 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.02□□□□□ -0.33
TMEM53Q6P2H8 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
TMEM53Q6P2H8 PPP2R1A-205ENST00000462990 2730 ntTSL 2 BASIC13.02□□□□□ -0.33
TMEM53Q6P2H8 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TMEM53Q6P2H8 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TMEM53Q6P2H8 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TMEM53Q6P2H8 LPP-AS2-201ENST00000605573 2852 ntBASIC13.02□□□□□ -0.33
TMEM53Q6P2H8 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TMEM53Q6P2H8 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TMEM53Q6P2H8 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM53Q6P2H8 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.01□□□□□ -0.33
TMEM53Q6P2H8 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM53Q6P2H8 G2E3-202ENST00000438909 2334 ntTSL 2 BASIC13.01□□□□□ -0.33
TMEM53Q6P2H8 CICP7-201ENST00000432723 2477 ntBASIC13.01□□□□□ -0.33
TMEM53Q6P2H8 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM53Q6P2H8 KLK2-202ENST00000358049 2847 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM53Q6P2H8 AL645608.3-201ENST00000448179 3043 ntTSL 2 BASIC13.01□□□□□ -0.33
TMEM53Q6P2H8 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC13.01□□□□□ -0.33
TMEM53Q6P2H8 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM53Q6P2H8 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM53Q6P2H8 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM53Q6P2H8 RN7SKP175-201ENST00000408472 289 ntBASIC13.01□□□□□ -0.33
TMEM53Q6P2H8 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM53Q6P2H8 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
TMEM53Q6P2H8 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.01□□□□□ -0.33
TMEM53Q6P2H8 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.01□□□□□ -0.33
TMEM53Q6P2H8 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.01□□□□□ -0.33
TMEM53Q6P2H8 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.01□□□□□ -0.33
TMEM53Q6P2H8 AC131206.1-201ENST00000538078 1211 ntBASIC13.01□□□□□ -0.33
TMEM53Q6P2H8 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.01□□□□□ -0.33
TMEM53Q6P2H8 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.01□□□□□ -0.33
TMEM53Q6P2H8 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.01□□□□□ -0.33
TMEM53Q6P2H8 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.01□□□□□ -0.33
TMEM53Q6P2H8 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM53Q6P2H8 RN7SL713P-201ENST00000582127 302 ntBASIC13.01□□□□□ -0.33
TMEM53Q6P2H8 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.01□□□□□ -0.33
TMEM53Q6P2H8 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.01□□□□□ -0.33
TMEM53Q6P2H8 AC017083.2-201ENST00000608069 979 ntBASIC13.01□□□□□ -0.33
TMEM53Q6P2H8 AC133552.6-201ENST00000613406 534 ntBASIC13.01□□□□□ -0.33
TMEM53Q6P2H8 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
TMEM53Q6P2H8 KDM3A-216ENST00000542128 4311 ntTSL 5 BASIC13.01□□□□□ -0.33
TMEM53Q6P2H8 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM53Q6P2H8 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM53Q6P2H8 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.01□□□□□ -0.33
TMEM53Q6P2H8 AC215219.1-201ENST00000400706 1817 ntBASIC13.01□□□□□ -0.33
TMEM53Q6P2H8 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
TMEM53Q6P2H8 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM53Q6P2H8 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM53Q6P2H8 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
TMEM53Q6P2H8 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.01□□□□□ -0.33
TMEM53Q6P2H8 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
TMEM53Q6P2H8 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
TMEM53Q6P2H8 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM53Q6P2H8 COG4-202ENST00000393612 2756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM53Q6P2H8 BCDIN3D-AS1-201ENST00000548872 3078 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM53Q6P2H8 EHD1-213ENST00000621096 3336 ntTSL 5 BASIC13.01□□□□□ -0.33
TMEM53Q6P2H8 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM53Q6P2H8 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TMEM53Q6P2H8 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM53Q6P2H8 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM53Q6P2H8 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TMEM53Q6P2H8 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC13□□□□□ -0.33
TMEM53Q6P2H8 RRBP1-203ENST00000377807 3792 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
TMEM53Q6P2H8 ST3GAL6-228ENST00000613264 3399 ntTSL 1 (best) BASIC13□□□□□ -0.33
TMEM53Q6P2H8 ALOXE3-201ENST00000318227 3053 ntTSL 2 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms