Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 KRT42P-201ENST00000398469 2864 ntTSL 2 BASIC16.04■□□□□ 0.16
CLCN1P35523 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CLCN1P35523 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CLCN1P35523 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCN1P35523 AL035696.2-201ENST00000407941 709 ntBASIC16.04■□□□□ 0.16
CLCN1P35523 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCN1P35523 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCN1P35523 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCN1P35523 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CLCN1P35523 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCN1P35523 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.04■□□□□ 0.16
CLCN1P35523 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
CLCN1P35523 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCN1P35523 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.04■□□□□ 0.16
CLCN1P35523 MIR5189-201ENST00000577370 114 ntBASIC16.04■□□□□ 0.16
CLCN1P35523 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.04■□□□□ 0.16
CLCN1P35523 AC145423.3-201ENST00000615987 467 ntBASIC16.04■□□□□ 0.16
CLCN1P35523 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.04■□□□□ 0.16
CLCN1P35523 AC025048.6-201ENST00000634326 1161 ntBASIC16.04■□□□□ 0.16
CLCN1P35523 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC16.04■□□□□ 0.16
CLCN1P35523 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CLCN1P35523 PARG-207ENST00000616448 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCN1P35523 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLCN1P35523 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CLCN1P35523 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCN1P35523 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CLCN1P35523 CTAGE10P-201ENST00000318353 2408 ntBASIC16.04■□□□□ 0.16
CLCN1P35523 NLRP7-201ENST00000328092 3299 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
CLCN1P35523 SARS-202ENST00000369923 1882 ntTSL 5 BASIC16.03■□□□□ 0.16
CLCN1P35523 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN1P35523 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN1P35523 DUSP11-202ENST00000443070 2175 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN1P35523 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN1P35523 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN1P35523 IP6K1-202ENST00000395238 4117 ntTSL 3 BASIC16.03■□□□□ 0.16
CLCN1P35523 GRIK5-202ENST00000301218 3310 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN1P35523 HMBOX1-203ENST00000397358 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN1P35523 FERMT2-202ENST00000343279 3247 ntTSL 5 BASIC16.03■□□□□ 0.16
CLCN1P35523 SCP2-203ENST00000371514 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN1P35523 KCNC2-201ENST00000298972 3563 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CLCN1P35523 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN1P35523 AC009549.1-201ENST00000603468 1686 ntBASIC16.03■□□□□ 0.16
CLCN1P35523 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN1P35523 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN1P35523 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.03■□□□□ 0.16
CLCN1P35523 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CLCN1P35523 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.03■□□□□ 0.16
CLCN1P35523 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.03■□□□□ 0.16
CLCN1P35523 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.03■□□□□ 0.16
CLCN1P35523 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN1P35523 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN1P35523 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.03■□□□□ 0.16
CLCN1P35523 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.03■□□□□ 0.16
CLCN1P35523 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.03■□□□□ 0.16
CLCN1P35523 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC16.03■□□□□ 0.16
CLCN1P35523 AL357060.2-202ENST00000606998 1959 ntTSL 2 BASIC16.03■□□□□ 0.16
CLCN1P35523 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC16.03■□□□□ 0.16
CLCN1P35523 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.03■□□□□ 0.16
CLCN1P35523 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CLCN1P35523 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN1P35523 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN1P35523 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN1P35523 APOBR-201ENST00000431282 3765 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CLCN1P35523 CAPN8-201ENST00000366872 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLCN1P35523 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CLCN1P35523 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.02■□□□□ 0.16
CLCN1P35523 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CLCN1P35523 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC16.02■□□□□ 0.16
CLCN1P35523 TMBIM6-227ENST00000552699 2964 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CLCN1P35523 SOX30-201ENST00000265007 3265 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLCN1P35523 NUP62-208ENST00000596217 3590 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CLCN1P35523 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLCN1P35523 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLCN1P35523 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLCN1P35523 AL138709.1-201ENST00000614840 1693 ntBASIC16.02■□□□□ 0.16
CLCN1P35523 CRHR2-201ENST00000341843 3131 ntTSL 5 BASIC16.02■□□□□ 0.16
CLCN1P35523 CHIAP2-201ENST00000369743 2829 ntTSL 5 BASIC16.02■□□□□ 0.16
CLCN1P35523 ZNF133-201ENST00000316358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLCN1P35523 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLCN1P35523 YTHDF2-208ENST00000541996 2719 ntTSL 2 BASIC16.02■□□□□ 0.16
CLCN1P35523 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.02■□□□□ 0.16
CLCN1P35523 RBM39-243ENST00000528062 2421 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLCN1P35523 VPS33B-202ENST00000535906 2420 ntTSL 2 BASIC16.02■□□□□ 0.16
CLCN1P35523 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CLCN1P35523 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.02■□□□□ 0.16
CLCN1P35523 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLCN1P35523 AP006294.1-201ENST00000415407 339 ntBASIC16.02■□□□□ 0.16
CLCN1P35523 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.02■□□□□ 0.16
CLCN1P35523 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.02■□□□□ 0.16
CLCN1P35523 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.02■□□□□ 0.16
CLCN1P35523 RN7SL837P-201ENST00000463010 287 ntBASIC16.02■□□□□ 0.16
CLCN1P35523 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.02■□□□□ 0.16
CLCN1P35523 TDH-203ENST00000531764 1110 ntBASIC16.02■□□□□ 0.16
CLCN1P35523 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.02■□□□□ 0.16
CLCN1P35523 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.02■□□□□ 0.16
CLCN1P35523 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.02■□□□□ 0.16
CLCN1P35523 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLCN1P35523 LINC00523-206ENST00000556697 2071 ntTSL 2 BASIC16.02■□□□□ 0.15
CLCN1P35523 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLCN1P35523 SALL4P5-201ENST00000419001 1760 ntBASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms