Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 LINC00662-204ENST00000588027 562 ntTSL 5 BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 LINC02154-201ENST00000412485 1497 ntTSL 2 BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 IMMP1L-201ENST00000278200 795 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 HBD-202ENST00000380299 785 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 SYCP3-203ENST00000392927 1120 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 AC092100.1-201ENST00000435148 702 ntTSL 3 BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 IGHVII-33-1-201ENST00000524010 280 ntBASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 TEX38-204ENST00000564373 637 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 IGHV1OR16-3-201ENST00000568138 205 ntBASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 SMIM22-206ENST00000589327 629 ntAPPRIS P4 TSL 1 (best) BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 AL359878.1-201ENST00000381466 1886 ntTSL 2 BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 MAFTRR-201ENST00000562921 1859 ntTSL 5 BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 TRIQK-219ENST00000523580 1630 ntTSL 2 BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 AC012370.2-204ENST00000601940 1320 ntTSL 5 BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 LINC00552-201ENST00000625151 2579 ntBASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 LAMTOR2-203ENST00000368305 655 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 AC013269.2-201ENST00000422631 727 ntTSL 2 BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 NR1I3-210ENST00000437437 973 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 AC010395.2-201ENST00000509899 904 ntBASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 MRNIP-216ENST00000521333 410 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 RRNAD1-211ENST00000524343 459 ntTSL 5 BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 AC078880.3-201ENST00000603439 1121 ntBASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 AC080038.2-201ENST00000617734 423 ntBASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 AC016526.4-201ENST00000636059 517 ntTSL 3 BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 BANP-203ENST00000393207 2438 ntTSL 2 BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 PCTP-202ENST00000325214 1856 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
ALMS1Q8TCU4 TUBAP-201ENST00000425085 1352 ntBASIC9.02□□□□□ -0.96
ALMS1Q8TCU4 OPRM1-210ENST00000452687 1352 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
ALMS1Q8TCU4 BSDC1-209ENST00000526031 1361 ntTSL 2 BASIC9.02□□□□□ -0.96
ALMS1Q8TCU4 SUSD3-201ENST00000375469 1114 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.96
ALMS1Q8TCU4 AP000346.2-202ENST00000425948 383 ntBASIC9.02□□□□□ -0.96
ALMS1Q8TCU4 H1FOO-202ENST00000503977 881 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
ALMS1Q8TCU4 AL109983.1-201ENST00000603234 646 ntBASIC9.02□□□□□ -0.96
ALMS1Q8TCU4 AC091905.3-201ENST00000624959 234 ntBASIC9.02□□□□□ -0.96
ALMS1Q8TCU4 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
ALMS1Q8TCU4 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
ALMS1Q8TCU4 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
ALMS1Q8TCU4 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
ALMS1Q8TCU4 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.96
ALMS1Q8TCU4 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.96
ALMS1Q8TCU4 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC9.02□□□□□ -0.96
ALMS1Q8TCU4 CICP14-201ENST00000629111 2732 ntBASIC9.02□□□□□ -0.96
ALMS1Q8TCU4 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC9.02□□□□□ -0.96
ALMS1Q8TCU4 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC9.02□□□□□ -0.96
ALMS1Q8TCU4 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 XYLB-203ENST00000427323 1666 ntTSL 2 BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 LIMS2-203ENST00000409254 867 ntTSL 3 BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 AL121790.2-201ENST00000553425 379 ntTSL 4 BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 RN7SL678P-201ENST00000579533 299 ntBASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 DMRTC1-201ENST00000595412 1190 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 AC012313.2-201ENST00000599952 1154 ntTSL 5 BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 AL590824.1-201ENST00000403828 1349 ntBASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 AL356653.1-201ENST00000402743 360 ntBASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 AC011997.1-201ENST00000409845 1032 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 AL049792.1-201ENST00000424708 1262 ntBASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 MTND6P7-201ENST00000433237 524 ntBASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 AQP7-207ENST00000447660 998 ntTSL 2 BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 AL110503.1-201ENST00000457224 534 ntTSL 3 BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 TCP10L-202ENST00000472557 732 ntAPPRIS ALT2 TSL 2 BASIC9.02□□□□□ -0.97
ALMS1Q8TCU4 RPL18P1-201ENST00000497218 552 ntBASIC9.02□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms