Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC093462.1-201ENST00000621167 1683 ntBASIC17.48■□□□□ 0.39
COL15A1P39059 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL15A1P39059 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL15A1P39059 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
COL15A1P39059 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.48■□□□□ 0.39
COL15A1P39059 UCKL1-AS1-201ENST00000623569 3602 ntBASIC17.47■□□□□ 0.39
COL15A1P39059 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC17.47■□□□□ 0.39
COL15A1P39059 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COL15A1P39059 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
COL15A1P39059 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COL15A1P39059 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC17.47■□□□□ 0.39
COL15A1P39059 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
COL15A1P39059 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL15A1P39059 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL15A1P39059 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL15A1P39059 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COL15A1P39059 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC17.47■□□□□ 0.39
COL15A1P39059 HIST1H2APS2-201ENST00000454426 370 ntBASIC17.47■□□□□ 0.39
COL15A1P39059 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC17.47■□□□□ 0.39
COL15A1P39059 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC17.47■□□□□ 0.39
COL15A1P39059 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC17.47■□□□□ 0.39
COL15A1P39059 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL15A1P39059 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
COL15A1P39059 OS9-204ENST00000389146 2091 ntTSL 2 BASIC17.47■□□□□ 0.39
COL15A1P39059 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
COL15A1P39059 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
COL15A1P39059 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
COL15A1P39059 AC008620.2-201ENST00000510294 1569 ntBASIC17.47■□□□□ 0.39
COL15A1P39059 AL157996.1-201ENST00000624684 2299 ntBASIC17.47■□□□□ 0.39
COL15A1P39059 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC17.47■□□□□ 0.39
COL15A1P39059 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC17.47■□□□□ 0.39
COL15A1P39059 AC089987.1-201ENST00000551654 2209 ntBASIC17.47■□□□□ 0.39
COL15A1P39059 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL15A1P39059 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL15A1P39059 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL15A1P39059 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
COL15A1P39059 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
COL15A1P39059 AC064850.1-201ENST00000413279 1398 ntBASIC17.46■□□□□ 0.39
COL15A1P39059 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.46■□□□□ 0.39
COL15A1P39059 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL15A1P39059 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC17.46■□□□□ 0.39
COL15A1P39059 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
COL15A1P39059 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL15A1P39059 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
COL15A1P39059 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL15A1P39059 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL15A1P39059 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
COL15A1P39059 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
COL15A1P39059 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL15A1P39059 RPL18AP16-201ENST00000424057 531 ntBASIC17.46■□□□□ 0.39
COL15A1P39059 BRI3P1-201ENST00000440440 378 ntBASIC17.46■□□□□ 0.39
COL15A1P39059 AC113347.2-201ENST00000512350 279 ntBASIC17.46■□□□□ 0.39
COL15A1P39059 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC17.46■□□□□ 0.39
COL15A1P39059 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC17.46■□□□□ 0.39
COL15A1P39059 SRP14-208ENST00000560773 468 ntTSL 3 BASIC17.46■□□□□ 0.39
COL15A1P39059 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC17.46■□□□□ 0.39
COL15A1P39059 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC17.46■□□□□ 0.39
COL15A1P39059 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC17.46■□□□□ 0.39
COL15A1P39059 AC048382.6-201ENST00000621980 1223 ntBASIC17.46■□□□□ 0.39
COL15A1P39059 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC17.46■□□□□ 0.39
COL15A1P39059 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL15A1P39059 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL15A1P39059 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL15A1P39059 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL15A1P39059 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC17.46■□□□□ 0.39
COL15A1P39059 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC17.46■□□□□ 0.39
COL15A1P39059 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
COL15A1P39059 FAM226B-201ENST00000602508 1490 ntBASIC17.46■□□□□ 0.39
COL15A1P39059 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
COL15A1P39059 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL15A1P39059 AC068418.2-201ENST00000577309 3703 ntBASIC17.46■□□□□ 0.39
COL15A1P39059 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
COL15A1P39059 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
COL15A1P39059 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
COL15A1P39059 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
COL15A1P39059 FMO6P-201ENST00000236166 1620 ntBASIC17.45■□□□□ 0.38
COL15A1P39059 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
COL15A1P39059 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC17.45■□□□□ 0.38
COL15A1P39059 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
COL15A1P39059 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
COL15A1P39059 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
COL15A1P39059 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC17.45■□□□□ 0.38
COL15A1P39059 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
COL15A1P39059 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COL15A1P39059 MPV17-209ENST00000405983 859 ntTSL 5 BASIC17.45■□□□□ 0.38
COL15A1P39059 AL137244.1-201ENST00000422931 865 ntBASIC17.45■□□□□ 0.38
COL15A1P39059 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC17.45■□□□□ 0.38
COL15A1P39059 AC007279.1-201ENST00000448547 837 ntBASIC17.45■□□□□ 0.38
COL15A1P39059 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC17.45■□□□□ 0.38
COL15A1P39059 AC104212.2-201ENST00000478813 628 ntBASIC17.45■□□□□ 0.38
COL15A1P39059 BCL2L12P1-201ENST00000508390 733 ntBASIC17.45■□□□□ 0.38
COL15A1P39059 IGHEP1-201ENST00000521393 651 ntBASIC17.45■□□□□ 0.38
COL15A1P39059 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC17.45■□□□□ 0.38
COL15A1P39059 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC17.45■□□□□ 0.38
COL15A1P39059 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC17.45■□□□□ 0.38
COL15A1P39059 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC17.45■□□□□ 0.38
COL15A1P39059 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC17.45■□□□□ 0.38
COL15A1P39059 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC17.45■□□□□ 0.38
COL15A1P39059 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC17.45■□□□□ 0.38
COL15A1P39059 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms