Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.58□□□□□ -0.39
ALX3O95076 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
ALX3O95076 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.58□□□□□ -0.39
ALX3O95076 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
ALX3O95076 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ALX3O95076 KRT8P28-201ENST00000433288 1390 ntBASIC12.58□□□□□ -0.4
ALX3O95076 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ALX3O95076 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ALX3O95076 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ALX3O95076 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
ALX3O95076 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
ALX3O95076 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
ALX3O95076 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ALX3O95076 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
ALX3O95076 TLE3-208ENST00000557907 2295 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ALX3O95076 RNF219-AS1-209ENST00000606429 2418 ntTSL 2 BASIC12.58□□□□□ -0.4
ALX3O95076 MZF1-AS1-202ENST00000600534 2567 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ALX3O95076 STRA6-206ENST00000449139 2732 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
ALX3O95076 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ALX3O95076 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ALX3O95076 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
ALX3O95076 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ALX3O95076 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ALX3O95076 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ALX3O95076 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC12.58□□□□□ -0.4
ALX3O95076 MIR1909-201ENST00000411312 80 ntBASIC12.58□□□□□ -0.4
ALX3O95076 CD8B2-202ENST00000417670 633 ntBASIC12.58□□□□□ -0.4
ALX3O95076 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC12.58□□□□□ -0.4
ALX3O95076 AC091917.2-201ENST00000505002 744 ntBASIC12.58□□□□□ -0.4
ALX3O95076 AL391280.1-201ENST00000506969 1062 ntBASIC12.58□□□□□ -0.4
ALX3O95076 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ALX3O95076 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.58□□□□□ -0.4
ALX3O95076 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
ALX3O95076 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC12.58□□□□□ -0.4
ALX3O95076 AC106820.3-201ENST00000561653 397 ntBASIC12.58□□□□□ -0.4
ALX3O95076 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ALX3O95076 AC008494.3-201ENST00000606615 944 ntBASIC12.58□□□□□ -0.4
ALX3O95076 EPM2A-207ENST00000611340 2786 ntTSL 2 BASIC12.58□□□□□ -0.4
ALX3O95076 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC12.58□□□□□ -0.4
ALX3O95076 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ALX3O95076 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC12.58□□□□□ -0.4
ALX3O95076 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ALX3O95076 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ALX3O95076 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ALX3O95076 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ALX3O95076 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ALX3O95076 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ALX3O95076 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ALX3O95076 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ALX3O95076 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ALX3O95076 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
ALX3O95076 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ALX3O95076 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
ALX3O95076 AL021155.1-201ENST00000438808 2637 ntBASIC12.58□□□□□ -0.4
ALX3O95076 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ALX3O95076 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
ALX3O95076 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ALX3O95076 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
ALX3O95076 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC12.57□□□□□ -0.4
ALX3O95076 AC124319.4-201ENST00000622931 2161 ntBASIC12.57□□□□□ -0.4
ALX3O95076 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ALX3O95076 SNX14-201ENST00000314673 3486 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
ALX3O95076 SMG8-202ENST00000543872 3477 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
ALX3O95076 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ALX3O95076 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
ALX3O95076 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC12.57□□□□□ -0.4
ALX3O95076 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ALX3O95076 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
ALX3O95076 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ALX3O95076 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ALX3O95076 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ALX3O95076 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ALX3O95076 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ALX3O95076 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ALX3O95076 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
ALX3O95076 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ALX3O95076 TPM3P8-201ENST00000330554 643 ntBASIC12.57□□□□□ -0.4
ALX3O95076 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
ALX3O95076 GUK1-206ENST00000366723 845 ntTSL 5 BASIC12.57□□□□□ -0.4
ALX3O95076 RPF1-202ENST00000370656 724 ntTSL 2 BASIC12.57□□□□□ -0.4
ALX3O95076 AC092506.1-202ENST00000401022 528 ntBASIC12.57□□□□□ -0.4
ALX3O95076 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ALX3O95076 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
ALX3O95076 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ALX3O95076 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ALX3O95076 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC12.57□□□□□ -0.4
ALX3O95076 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC12.57□□□□□ -0.4
ALX3O95076 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ALX3O95076 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ALX3O95076 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.57□□□□□ -0.4
ALX3O95076 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.57□□□□□ -0.4
ALX3O95076 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ALX3O95076 AC135782.3-201ENST00000562782 2105 ntBASIC12.57□□□□□ -0.4
ALX3O95076 TP53TG3HP-202ENST00000569755 579 ntBASIC12.57□□□□□ -0.4
ALX3O95076 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.57□□□□□ -0.4
ALX3O95076 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
ALX3O95076 KRT18P8-201ENST00000581937 1246 ntBASIC12.57□□□□□ -0.4
ALX3O95076 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC12.57□□□□□ -0.4
ALX3O95076 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC12.57□□□□□ -0.4
ALX3O95076 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms