Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC19.2■□□□□ 0.66
CPS1P31327 AP001102.1-201ENST00000528959 409 ntBASIC19.2■□□□□ 0.66
CPS1P31327 AC099524.1-203ENST00000565272 756 ntTSL 5 BASIC19.2■□□□□ 0.66
CPS1P31327 MIR1587-201ENST00000583319 53 ntBASIC19.2■□□□□ 0.66
CPS1P31327 AC092634.5-206ENST00000593670 812 ntTSL 5 BASIC19.2■□□□□ 0.66
CPS1P31327 AL356740.1-201ENST00000602192 1297 ntBASIC19.2■□□□□ 0.66
CPS1P31327 PILRB-213ENST00000609309 993 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPS1P31327 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPS1P31327 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CPS1P31327 METTL22-203ENST00000561758 1312 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CPS1P31327 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CPS1P31327 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CPS1P31327 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CPS1P31327 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
CPS1P31327 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPS1P31327 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPS1P31327 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CPS1P31327 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC19.19■□□□□ 0.66
CPS1P31327 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPS1P31327 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPS1P31327 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CPS1P31327 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPS1P31327 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPS1P31327 OR52N1-201ENST00000317078 963 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CPS1P31327 LYG2-201ENST00000333017 862 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CPS1P31327 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPS1P31327 CACYBPP3-201ENST00000406011 625 ntBASIC19.19■□□□□ 0.66
CPS1P31327 AC053503.4-201ENST00000431827 224 ntTSL 5 BASIC19.19■□□□□ 0.66
CPS1P31327 DHRSX-IT1-201ENST00000437244 651 ntTSL 5 BASIC19.19■□□□□ 0.66
CPS1P31327 ATP5G1P7-201ENST00000444398 400 ntBASIC19.19■□□□□ 0.66
CPS1P31327 AC010997.1-201ENST00000447646 350 ntBASIC19.19■□□□□ 0.66
CPS1P31327 RN7SL148P-201ENST00000467120 279 ntBASIC19.19■□□□□ 0.66
CPS1P31327 RN7SL22P-201ENST00000471800 269 ntBASIC19.19■□□□□ 0.66
CPS1P31327 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPS1P31327 AC114812.4-201ENST00000506676 757 ntBASIC19.19■□□□□ 0.66
CPS1P31327 AC025219.1-201ENST00000559299 526 ntTSL 4 BASIC19.19■□□□□ 0.66
CPS1P31327 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC19.19■□□□□ 0.66
CPS1P31327 AC008894.2-202ENST00000599676 1027 ntTSL 3 BASIC19.19■□□□□ 0.66
CPS1P31327 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC19.19■□□□□ 0.66
CPS1P31327 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPS1P31327 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CPS1P31327 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CPS1P31327 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC19.18■□□□□ 0.66
CPS1P31327 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC19.18■□□□□ 0.66
CPS1P31327 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC19.18■□□□□ 0.66
CPS1P31327 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPS1P31327 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPS1P31327 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPS1P31327 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPS1P31327 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CPS1P31327 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CPS1P31327 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CPS1P31327 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
CPS1P31327 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPS1P31327 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC19.18■□□□□ 0.66
CPS1P31327 LINC01137-201ENST00000424989 1395 ntTSL 2 BASIC19.18■□□□□ 0.66
CPS1P31327 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPS1P31327 NR0B1-201ENST00000378963 475 ntTSL 2 BASIC19.18■□□□□ 0.66
CPS1P31327 SMARCB1-203ENST00000407082 1182 ntTSL 5 BASIC19.18■□□□□ 0.66
CPS1P31327 SNAP25-AS1-202ENST00000426491 804 ntTSL 5 BASIC19.18■□□□□ 0.66
CPS1P31327 FHIT-205ENST00000476844 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPS1P31327 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC19.18■□□□□ 0.66
CPS1P31327 AC009646.2-202ENST00000524425 826 ntTSL 3 BASIC19.18■□□□□ 0.66
CPS1P31327 MT1L-201ENST00000565768 411 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CPS1P31327 SMIM22-206ENST00000589327 629 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPS1P31327 Metazoa_SRP.64-201ENST00000611904 268 ntBASIC19.18■□□□□ 0.66
CPS1P31327 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CPS1P31327 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC19.18■□□□□ 0.66
CPS1P31327 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC19.18■□□□□ 0.66
CPS1P31327 OS9-207ENST00000439210 1946 ntTSL 2 BASIC19.18■□□□□ 0.66
CPS1P31327 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CPS1P31327 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CPS1P31327 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC19.18■□□□□ 0.66
CPS1P31327 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC19.18■□□□□ 0.66
CPS1P31327 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
CPS1P31327 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPS1P31327 RCC2P5-201ENST00000492126 1487 ntBASIC19.17■□□□□ 0.66
CPS1P31327 ANAPC15-203ENST00000502597 1481 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CPS1P31327 CACNA2D4-209ENST00000538450 1498 ntTSL 2 BASIC19.17■□□□□ 0.66
CPS1P31327 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPS1P31327 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPS1P31327 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPS1P31327 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CPS1P31327 GZMH-201ENST00000216338 909 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPS1P31327 LY6G6F-201ENST00000375832 920 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPS1P31327 RPL13AP5-201ENST00000439189 612 ntBASIC19.17■□□□□ 0.66
CPS1P31327 MTHFD2P7-201ENST00000483867 983 ntBASIC19.17■□□□□ 0.66
CPS1P31327 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPS1P31327 RPS23-205ENST00000510019 1019 ntTSL 4 BASIC19.17■□□□□ 0.66
CPS1P31327 AC022634.2-201ENST00000521504 382 ntTSL 3 BASIC19.17■□□□□ 0.66
CPS1P31327 AC100858.2-201ENST00000531948 487 ntTSL 3 BASIC19.17■□□□□ 0.66
CPS1P31327 GABARAPL1-203ENST00000535576 792 ntTSL 5 BASIC19.17■□□□□ 0.66
CPS1P31327 AC025259.1-201ENST00000550301 647 ntTSL 3 BASIC19.17■□□□□ 0.66
CPS1P31327 OSGIN1-206ENST00000565123 833 ntTSL 2 BASIC19.17■□□□□ 0.66
CPS1P31327 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CPS1P31327 AC136475.9-201ENST00000605240 497 ntBASIC19.17■□□□□ 0.66
CPS1P31327 AL645940.1-201ENST00000606432 594 ntTSL 2 BASIC19.17■□□□□ 0.66
CPS1P31327 AC092535.4-201ENST00000609548 397 ntBASIC19.17■□□□□ 0.66
CPS1P31327 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC19.17■□□□□ 0.66
CPS1P31327 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms