Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CTLA4P16410 AC092053.3-201ENST00000641308 4975 ntBASIC12.53□□□□□ -0.4
CTLA4P16410 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTLA4P16410 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CTLA4P16410 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTLA4P16410 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTLA4P16410 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTLA4P16410 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTLA4P16410 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTLA4P16410 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTLA4P16410 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CTLA4P16410 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CTLA4P16410 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTLA4P16410 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTLA4P16410 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTLA4P16410 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTLA4P16410 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CTLA4P16410 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
CTLA4P16410 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTLA4P16410 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.53□□□□□ -0.4
CTLA4P16410 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CTLA4P16410 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CTLA4P16410 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CTLA4P16410 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
CTLA4P16410 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CTLA4P16410 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
CTLA4P16410 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC12.52□□□□□ -0.4
CTLA4P16410 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CTLA4P16410 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CTLA4P16410 LINC00638-201ENST00000555578 2518 ntBASIC12.52□□□□□ -0.4
CTLA4P16410 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC12.52□□□□□ -0.4
CTLA4P16410 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
CTLA4P16410 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
CTLA4P16410 CARS-214ENST00000529772 2637 ntTSL 2 BASIC12.52□□□□□ -0.4
CTLA4P16410 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CTLA4P16410 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.52□□□□□ -0.41
CTLA4P16410 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CTLA4P16410 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CTLA4P16410 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.52□□□□□ -0.41
CTLA4P16410 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CTLA4P16410 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CTLA4P16410 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC12.52□□□□□ -0.41
CTLA4P16410 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC12.52□□□□□ -0.41
CTLA4P16410 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC12.52□□□□□ -0.41
CTLA4P16410 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC12.52□□□□□ -0.41
CTLA4P16410 RCC2P8-201ENST00000502779 1035 ntBASIC12.52□□□□□ -0.41
CTLA4P16410 CHCHD2P2-201ENST00000503744 321 ntBASIC12.52□□□□□ -0.41
CTLA4P16410 CD164-210ENST00000512821 964 ntTSL 2 BASIC12.52□□□□□ -0.41
CTLA4P16410 AC126915.1-201ENST00000522847 1038 ntBASIC12.52□□□□□ -0.41
CTLA4P16410 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CTLA4P16410 NOP2-220ENST00000545915 630 ntTSL 2 BASIC12.52□□□□□ -0.41
CTLA4P16410 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC12.52□□□□□ -0.41
CTLA4P16410 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CTLA4P16410 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CTLA4P16410 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
CTLA4P16410 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC12.52□□□□□ -0.41
CTLA4P16410 AL022334.2-201ENST00000610000 484 ntBASIC12.52□□□□□ -0.41
CTLA4P16410 AC091271.1-201ENST00000611877 1162 ntBASIC12.52□□□□□ -0.41
CTLA4P16410 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC12.52□□□□□ -0.41
CTLA4P16410 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC12.52□□□□□ -0.41
CTLA4P16410 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CTLA4P16410 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CTLA4P16410 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC12.52□□□□□ -0.41
CTLA4P16410 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CTLA4P16410 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CTLA4P16410 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC12.52□□□□□ -0.41
CTLA4P16410 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC12.52□□□□□ -0.41
CTLA4P16410 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC12.52□□□□□ -0.41
CTLA4P16410 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.52□□□□□ -0.41
CTLA4P16410 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CTLA4P16410 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC12.52□□□□□ -0.41
CTLA4P16410 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
CTLA4P16410 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC12.52□□□□□ -0.41
CTLA4P16410 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
CTLA4P16410 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CTLA4P16410 PEG13-201ENST00000631594 5667 ntBASIC12.52□□□□□ -0.41
CTLA4P16410 PHB-210ENST00000511832 1509 ntTSL 2 BASIC12.52□□□□□ -0.41
CTLA4P16410 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CTLA4P16410 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.52□□□□□ -0.41
CTLA4P16410 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC12.52□□□□□ -0.41
CTLA4P16410 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CTLA4P16410 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC12.52□□□□□ -0.41
CTLA4P16410 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CTLA4P16410 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CTLA4P16410 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CTLA4P16410 AC019294.4-201ENST00000561777 2905 ntBASIC12.51□□□□□ -0.41
CTLA4P16410 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CTLA4P16410 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CTLA4P16410 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CTLA4P16410 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CTLA4P16410 AC108024.1-201ENST00000626286 1721 ntBASIC12.51□□□□□ -0.41
CTLA4P16410 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC12.51□□□□□ -0.41
CTLA4P16410 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC12.51□□□□□ -0.41
CTLA4P16410 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
CTLA4P16410 PCDHA6-201ENST00000378126 3267 ntBASIC12.51□□□□□ -0.41
CTLA4P16410 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.51□□□□□ -0.41
CTLA4P16410 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CTLA4P16410 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CTLA4P16410 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
CTLA4P16410 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms