Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSR3Q9UNL2 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC12.63□□□□□ -0.39
SSR3Q9UNL2 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSR3Q9UNL2 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSR3Q9UNL2 PPP1R26P2-201ENST00000611403 3595 ntBASIC12.63□□□□□ -0.39
SSR3Q9UNL2 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SSR3Q9UNL2 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSR3Q9UNL2 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC12.63□□□□□ -0.39
SSR3Q9UNL2 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSR3Q9UNL2 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSR3Q9UNL2 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSR3Q9UNL2 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSR3Q9UNL2 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SSR3Q9UNL2 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SSR3Q9UNL2 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
SSR3Q9UNL2 HNRNPFP1-201ENST00000391730 1133 ntBASIC12.63□□□□□ -0.39
SSR3Q9UNL2 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.63□□□□□ -0.39
SSR3Q9UNL2 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC12.63□□□□□ -0.39
SSR3Q9UNL2 DNAJB3-201ENST00000446806 729 ntBASIC12.63□□□□□ -0.39
SSR3Q9UNL2 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC12.63□□□□□ -0.39
SSR3Q9UNL2 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC12.63□□□□□ -0.39
SSR3Q9UNL2 KRT18P25-201ENST00000508931 1278 ntBASIC12.63□□□□□ -0.39
SSR3Q9UNL2 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC12.63□□□□□ -0.39
SSR3Q9UNL2 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.63□□□□□ -0.39
SSR3Q9UNL2 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC12.63□□□□□ -0.39
SSR3Q9UNL2 AC068587.3-201ENST00000526613 355 ntBASIC12.63□□□□□ -0.39
SSR3Q9UNL2 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
SSR3Q9UNL2 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC12.63□□□□□ -0.39
SSR3Q9UNL2 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.63□□□□□ -0.39
SSR3Q9UNL2 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC12.63□□□□□ -0.39
SSR3Q9UNL2 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC12.63□□□□□ -0.39
SSR3Q9UNL2 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC12.63□□□□□ -0.39
SSR3Q9UNL2 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC12.63□□□□□ -0.39
SSR3Q9UNL2 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC12.63□□□□□ -0.39
SSR3Q9UNL2 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC12.63□□□□□ -0.39
SSR3Q9UNL2 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
SSR3Q9UNL2 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC12.63□□□□□ -0.39
SSR3Q9UNL2 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SSR3Q9UNL2 ABBA01031660.1-201ENST00000635219 756 ntBASIC12.63□□□□□ -0.39
SSR3Q9UNL2 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC12.63□□□□□ -0.39
SSR3Q9UNL2 MYRIP-201ENST00000302541 5077 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSR3Q9UNL2 TMEM246-202ENST00000374848 4244 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSR3Q9UNL2 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSR3Q9UNL2 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SSR3Q9UNL2 DNAJC3-202ENST00000602402 5591 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSR3Q9UNL2 AC005695.1-201ENST00000574307 5672 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SSR3Q9UNL2 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSR3Q9UNL2 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SSR3Q9UNL2 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
SSR3Q9UNL2 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSR3Q9UNL2 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC12.63□□□□□ -0.39
SSR3Q9UNL2 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSR3Q9UNL2 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SSR3Q9UNL2 GATAD2A-201ENST00000358713 5510 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSR3Q9UNL2 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
SSR3Q9UNL2 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSR3Q9UNL2 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC12.62□□□□□ -0.39
SSR3Q9UNL2 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSR3Q9UNL2 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSR3Q9UNL2 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SSR3Q9UNL2 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC12.62□□□□□ -0.39
SSR3Q9UNL2 LINC00638-201ENST00000555578 2518 ntBASIC12.62□□□□□ -0.39
SSR3Q9UNL2 SRGAP3-202ENST00000383836 8656 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSR3Q9UNL2 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SSR3Q9UNL2 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SSR3Q9UNL2 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SSR3Q9UNL2 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SSR3Q9UNL2 NBPF12-208ENST00000617931 7061 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
SSR3Q9UNL2 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSR3Q9UNL2 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
SSR3Q9UNL2 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSR3Q9UNL2 AOC4P-203ENST00000566825 2289 ntBASIC12.62□□□□□ -0.39
SSR3Q9UNL2 DAPK1-201ENST00000358077 5743 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSR3Q9UNL2 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
SSR3Q9UNL2 MYO1C-202ENST00000361007 4734 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
SSR3Q9UNL2 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSR3Q9UNL2 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSR3Q9UNL2 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
SSR3Q9UNL2 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
SSR3Q9UNL2 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC12.62□□□□□ -0.39
SSR3Q9UNL2 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.62□□□□□ -0.39
SSR3Q9UNL2 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC12.62□□□□□ -0.39
SSR3Q9UNL2 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC12.62□□□□□ -0.39
SSR3Q9UNL2 AC245100.3-201ENST00000441281 285 ntBASIC12.62□□□□□ -0.39
SSR3Q9UNL2 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC12.62□□□□□ -0.39
SSR3Q9UNL2 KRT18P15-201ENST00000458108 1291 ntBASIC12.62□□□□□ -0.39
SSR3Q9UNL2 AC125807.1-201ENST00000483097 614 ntBASIC12.62□□□□□ -0.39
SSR3Q9UNL2 FTLP10-202ENST00000505798 471 ntBASIC12.62□□□□□ -0.39
SSR3Q9UNL2 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC12.62□□□□□ -0.39
SSR3Q9UNL2 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC12.62□□□□□ -0.39
SSR3Q9UNL2 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SSR3Q9UNL2 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SSR3Q9UNL2 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC12.62□□□□□ -0.39
SSR3Q9UNL2 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC12.62□□□□□ -0.39
SSR3Q9UNL2 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC12.62□□□□□ -0.39
SSR3Q9UNL2 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC12.62□□□□□ -0.39
SSR3Q9UNL2 POC1B-GALNT4-202ENST00000548729 5436 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SSR3Q9UNL2 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
SSR3Q9UNL2 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC12.62□□□□□ -0.39
SSR3Q9UNL2 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms