Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
UPF2Q9HAU5 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UPF2Q9HAU5 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UPF2Q9HAU5 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
UPF2Q9HAU5 AL358781.1-202ENST00000321081 1360 ntBASIC17.4■□□□□ 0.38
UPF2Q9HAU5 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UPF2Q9HAU5 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.4■□□□□ 0.38
UPF2Q9HAU5 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
UPF2Q9HAU5 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC17.4■□□□□ 0.38
UPF2Q9HAU5 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC17.4■□□□□ 0.38
UPF2Q9HAU5 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC17.4■□□□□ 0.38
UPF2Q9HAU5 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
UPF2Q9HAU5 AC026271.4-201ENST00000578214 1833 ntBASIC17.4■□□□□ 0.38
UPF2Q9HAU5 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
UPF2Q9HAU5 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
UPF2Q9HAU5 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UPF2Q9HAU5 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
UPF2Q9HAU5 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
UPF2Q9HAU5 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UPF2Q9HAU5 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UPF2Q9HAU5 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UPF2Q9HAU5 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
UPF2Q9HAU5 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.4■□□□□ 0.38
UPF2Q9HAU5 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UPF2Q9HAU5 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.4■□□□□ 0.38
UPF2Q9HAU5 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
UPF2Q9HAU5 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.4■□□□□ 0.38
UPF2Q9HAU5 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
UPF2Q9HAU5 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC17.4■□□□□ 0.38
UPF2Q9HAU5 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.4■□□□□ 0.38
UPF2Q9HAU5 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC17.4■□□□□ 0.38
UPF2Q9HAU5 MIR4683-201ENST00000579659 81 ntBASIC17.4■□□□□ 0.38
UPF2Q9HAU5 CTBP2P3-201ENST00000585629 1255 ntBASIC17.4■□□□□ 0.38
UPF2Q9HAU5 ECM1P1-201ENST00000604092 1279 ntBASIC17.4■□□□□ 0.38
UPF2Q9HAU5 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC17.4■□□□□ 0.38
UPF2Q9HAU5 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UPF2Q9HAU5 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UPF2Q9HAU5 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
UPF2Q9HAU5 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC17.4■□□□□ 0.38
UPF2Q9HAU5 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC17.4■□□□□ 0.38
UPF2Q9HAU5 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
UPF2Q9HAU5 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UPF2Q9HAU5 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UPF2Q9HAU5 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
UPF2Q9HAU5 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
UPF2Q9HAU5 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
UPF2Q9HAU5 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
UPF2Q9HAU5 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.39■□□□□ 0.38
UPF2Q9HAU5 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
UPF2Q9HAU5 SALL4P6-201ENST00000429385 1691 ntBASIC17.39■□□□□ 0.37
UPF2Q9HAU5 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
UPF2Q9HAU5 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
UPF2Q9HAU5 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
UPF2Q9HAU5 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UPF2Q9HAU5 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
UPF2Q9HAU5 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
UPF2Q9HAU5 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UPF2Q9HAU5 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC17.39■□□□□ 0.37
UPF2Q9HAU5 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC17.39■□□□□ 0.37
UPF2Q9HAU5 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
UPF2Q9HAU5 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
UPF2Q9HAU5 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
UPF2Q9HAU5 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.39■□□□□ 0.37
UPF2Q9HAU5 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.39■□□□□ 0.37
UPF2Q9HAU5 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.39■□□□□ 0.37
UPF2Q9HAU5 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.39■□□□□ 0.37
UPF2Q9HAU5 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.39■□□□□ 0.37
UPF2Q9HAU5 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.39■□□□□ 0.37
UPF2Q9HAU5 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
UPF2Q9HAU5 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.39■□□□□ 0.37
UPF2Q9HAU5 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.39■□□□□ 0.37
UPF2Q9HAU5 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
UPF2Q9HAU5 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
UPF2Q9HAU5 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
UPF2Q9HAU5 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17.39■□□□□ 0.37
UPF2Q9HAU5 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UPF2Q9HAU5 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UPF2Q9HAU5 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UPF2Q9HAU5 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC17.39■□□□□ 0.37
UPF2Q9HAU5 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC17.39■□□□□ 0.37
UPF2Q9HAU5 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC17.39■□□□□ 0.37
UPF2Q9HAU5 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UPF2Q9HAU5 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC17.39■□□□□ 0.37
UPF2Q9HAU5 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UPF2Q9HAU5 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC17.39■□□□□ 0.37
UPF2Q9HAU5 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
UPF2Q9HAU5 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
UPF2Q9HAU5 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC17.39■□□□□ 0.37
UPF2Q9HAU5 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC17.39■□□□□ 0.37
UPF2Q9HAU5 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC17.38■□□□□ 0.37
UPF2Q9HAU5 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UPF2Q9HAU5 AC108024.1-201ENST00000626286 1721 ntBASIC17.38■□□□□ 0.37
UPF2Q9HAU5 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UPF2Q9HAU5 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UPF2Q9HAU5 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
UPF2Q9HAU5 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UPF2Q9HAU5 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC17.38■□□□□ 0.37
UPF2Q9HAU5 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC17.38■□□□□ 0.37
UPF2Q9HAU5 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UPF2Q9HAU5 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms