Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC22.29■■□□□ 1.16
IFT140Q96RY7 METTL22-203ENST00000561758 1312 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
IFT140Q96RY7 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC22.29■■□□□ 1.16
IFT140Q96RY7 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC22.29■■□□□ 1.16
IFT140Q96RY7 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
IFT140Q96RY7 AC007950.2-201ENST00000615045 2347 ntBASIC22.29■■□□□ 1.16
IFT140Q96RY7 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC22.29■■□□□ 1.16
IFT140Q96RY7 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
IFT140Q96RY7 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
IFT140Q96RY7 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
IFT140Q96RY7 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
IFT140Q96RY7 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC22.29■■□□□ 1.16
IFT140Q96RY7 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
IFT140Q96RY7 OAZ3-202ENST00000400999 890 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
IFT140Q96RY7 AC090587.1-201ENST00000415809 494 ntTSL 3 BASIC22.28■■□□□ 1.16
IFT140Q96RY7 PARVG-208ENST00000466375 820 ntTSL 2 BASIC22.28■■□□□ 1.16
IFT140Q96RY7 NDUFB1-202ENST00000553514 454 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
IFT140Q96RY7 AC010547.1-202ENST00000567341 230 ntTSL 2 BASIC22.28■■□□□ 1.16
IFT140Q96RY7 AC013472.3-201ENST00000607407 659 ntBASIC22.28■■□□□ 1.16
IFT140Q96RY7 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC22.28■■□□□ 1.16
IFT140Q96RY7 CCDC175-201ENST00000281581 2487 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
IFT140Q96RY7 MGLL-202ENST00000398101 1414 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
IFT140Q96RY7 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
IFT140Q96RY7 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
IFT140Q96RY7 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
IFT140Q96RY7 ZSCAN5DP-201ENST00000600684 1488 ntBASIC22.28■■□□□ 1.16
IFT140Q96RY7 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC22.28■■□□□ 1.16
IFT140Q96RY7 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
IFT140Q96RY7 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
IFT140Q96RY7 POM121L14P-201ENST00000406100 1558 ntBASIC22.28■■□□□ 1.16
IFT140Q96RY7 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
IFT140Q96RY7 AL512488.1-201ENST00000433544 1671 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
IFT140Q96RY7 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC22.28■■□□□ 1.16
IFT140Q96RY7 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
IFT140Q96RY7 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC22.28■■□□□ 1.16
IFT140Q96RY7 TKT-201ENST00000296289 1931 ntTSL 5 BASIC22.28■■□□□ 1.16
IFT140Q96RY7 SDR16C5-203ENST00000522671 1988 ntTSL 2 BASIC22.28■■□□□ 1.16
IFT140Q96RY7 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
IFT140Q96RY7 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
IFT140Q96RY7 TIMM10-201ENST00000257245 680 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
IFT140Q96RY7 KRTAP10-8-201ENST00000334662 876 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
IFT140Q96RY7 COQ4-202ENST00000372875 928 ntTSL 2 BASIC22.28■■□□□ 1.16
IFT140Q96RY7 AC011997.1-201ENST00000409845 1032 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
IFT140Q96RY7 AL162595.1-201ENST00000429227 868 ntTSL 5 BASIC22.28■■□□□ 1.16
IFT140Q96RY7 AC079742.1-201ENST00000434951 357 ntTSL 3 BASIC22.28■■□□□ 1.16
IFT140Q96RY7 PGAP2-219ENST00000479072 894 ntTSL 3 BASIC22.28■■□□□ 1.16
IFT140Q96RY7 MRNIP-216ENST00000521333 410 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
IFT140Q96RY7 ZNF720-211ENST00000539915 837 ntTSL 3 BASIC22.28■■□□□ 1.16
IFT140Q96RY7 SMIM22-201ENST00000586005 366 ntAPPRIS P4 TSL 3 BASIC22.28■■□□□ 1.16
IFT140Q96RY7 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
IFT140Q96RY7 AC020910.6-201ENST00000623084 1459 ntBASIC22.27■■□□□ 1.16
IFT140Q96RY7 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
IFT140Q96RY7 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC22.27■■□□□ 1.16
IFT140Q96RY7 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
IFT140Q96RY7 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
IFT140Q96RY7 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
IFT140Q96RY7 KIR2DL1-201ENST00000291633 1203 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
IFT140Q96RY7 OAZ3-201ENST00000321531 851 ntTSL 5 BASIC22.27■■□□□ 1.16
IFT140Q96RY7 LINC00685-201ENST00000391707 428 ntTSL 5 BASIC22.27■■□□□ 1.16
IFT140Q96RY7 GAPDHP65-201ENST00000425487 1006 ntBASIC22.27■■□□□ 1.16
IFT140Q96RY7 HNRNPA1P7-201ENST00000521273 963 ntBASIC22.27■■□□□ 1.16
IFT140Q96RY7 PTS-204ENST00000525803 625 ntTSL 3 BASIC22.27■■□□□ 1.16
IFT140Q96RY7 BMF-209ENST00000561282 747 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
IFT140Q96RY7 RN7SL341P-201ENST00000613745 298 ntBASIC22.27■■□□□ 1.16
IFT140Q96RY7 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC22.27■■□□□ 1.16
IFT140Q96RY7 CDCA7L-202ENST00000373934 1830 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.15
IFT140Q96RY7 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
IFT140Q96RY7 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
IFT140Q96RY7 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC22.27■■□□□ 1.15
IFT140Q96RY7 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC22.27■■□□□ 1.15
IFT140Q96RY7 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC22.27■■□□□ 1.15
IFT140Q96RY7 AC027601.5-201ENST00000624065 2482 ntBASIC22.27■■□□□ 1.15
IFT140Q96RY7 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC22.26■■□□□ 1.15
IFT140Q96RY7 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
IFT140Q96RY7 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
IFT140Q96RY7 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
IFT140Q96RY7 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
IFT140Q96RY7 TRIQK-219ENST00000523580 1630 ntTSL 2 BASIC22.26■■□□□ 1.15
IFT140Q96RY7 ENO3-201ENST00000323997 1521 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
IFT140Q96RY7 HFE-205ENST00000352392 653 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
IFT140Q96RY7 LAMTOR2-203ENST00000368305 655 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
IFT140Q96RY7 EEF1GP3-201ENST00000421044 1288 ntBASIC22.26■■□□□ 1.15
IFT140Q96RY7 APRT-202ENST00000426324 664 ntTSL 2 BASIC22.26■■□□□ 1.15
IFT140Q96RY7 AC004112.1-201ENST00000431064 561 ntTSL 3 BASIC22.26■■□□□ 1.15
IFT140Q96RY7 AC007690.1-201ENST00000451924 468 ntBASIC22.26■■□□□ 1.15
IFT140Q96RY7 AC009238.3-201ENST00000512705 217 ntBASIC22.26■■□□□ 1.15
IFT140Q96RY7 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC22.26■■□□□ 1.15
IFT140Q96RY7 AC108673.2-201ENST00000608909 565 ntBASIC22.26■■□□□ 1.15
IFT140Q96RY7 AC020763.2-201ENST00000623155 1255 ntBASIC22.26■■□□□ 1.15
IFT140Q96RY7 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC22.26■■□□□ 1.15
IFT140Q96RY7 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
IFT140Q96RY7 AC020763.3-201ENST00000625095 2904 ntBASIC22.25■■□□□ 1.15
IFT140Q96RY7 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
IFT140Q96RY7 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
IFT140Q96RY7 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
IFT140Q96RY7 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
IFT140Q96RY7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
IFT140Q96RY7 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC22.25■■□□□ 1.15
IFT140Q96RY7 SH3GLB2-206ENST00000417224 1468 ntTSL 5 BASIC22.25■■□□□ 1.15
IFT140Q96RY7 LILRA5-201ENST00000432233 1363 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms