Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.85□□□□□ -0.19
TRIM23P36406 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM23P36406 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM23P36406 RNVU1-8-201ENST00000364272 125 ntBASIC13.85□□□□□ -0.19
TRIM23P36406 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM23P36406 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM23P36406 RN7SKP109-201ENST00000410592 316 ntBASIC13.85□□□□□ -0.19
TRIM23P36406 PFN2-202ENST00000423691 911 ntTSL 2 BASIC13.85□□□□□ -0.19
TRIM23P36406 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC13.85□□□□□ -0.19
TRIM23P36406 CD81-209ENST00000492627 886 ntTSL 3 BASIC13.85□□□□□ -0.19
TRIM23P36406 HINT1-205ENST00000508488 703 ntTSL 2 BASIC13.85□□□□□ -0.19
TRIM23P36406 COQ10BP2-201ENST00000513804 724 ntBASIC13.85□□□□□ -0.19
TRIM23P36406 CFL1-206ENST00000527344 962 ntTSL 2 BASIC13.85□□□□□ -0.19
TRIM23P36406 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
TRIM23P36406 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC13.85□□□□□ -0.19
TRIM23P36406 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM23P36406 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC13.85□□□□□ -0.19
TRIM23P36406 DBP-202ENST00000593500 712 ntTSL 2 BASIC13.85□□□□□ -0.19
TRIM23P36406 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC13.85□□□□□ -0.19
TRIM23P36406 AL359091.4-201ENST00000610052 409 ntBASIC13.85□□□□□ -0.19
TRIM23P36406 LINC00244-201ENST00000625073 613 ntBASIC13.85□□□□□ -0.19
TRIM23P36406 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM23P36406 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM23P36406 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM23P36406 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TRIM23P36406 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM23P36406 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM23P36406 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
TRIM23P36406 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.85□□□□□ -0.19
TRIM23P36406 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM23P36406 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM23P36406 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM23P36406 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM23P36406 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM23P36406 PHB-210ENST00000511832 1509 ntTSL 2 BASIC13.85□□□□□ -0.19
TRIM23P36406 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRIM23P36406 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.84□□□□□ -0.19
TRIM23P36406 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC13.84□□□□□ -0.19
TRIM23P36406 AC090502.4-201ENST00000551714 1386 ntBASIC13.84□□□□□ -0.19
TRIM23P36406 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM23P36406 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
TRIM23P36406 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.84□□□□□ -0.19
TRIM23P36406 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM23P36406 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM23P36406 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.84□□□□□ -0.19
TRIM23P36406 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM23P36406 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM23P36406 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM23P36406 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM23P36406 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM23P36406 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM23P36406 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC13.84□□□□□ -0.19
TRIM23P36406 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
TRIM23P36406 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM23P36406 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM23P36406 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC13.84□□□□□ -0.19
TRIM23P36406 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC13.84□□□□□ -0.19
TRIM23P36406 AC018463.1-201ENST00000456674 917 ntBASIC13.84□□□□□ -0.19
TRIM23P36406 BUD31-205ENST00000456893 512 ntTSL 5 BASIC13.84□□□□□ -0.19
TRIM23P36406 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC13.84□□□□□ -0.19
TRIM23P36406 RPS23-204ENST00000507980 836 ntTSL 2 BASIC13.84□□□□□ -0.19
TRIM23P36406 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC13.84□□□□□ -0.19
TRIM23P36406 AP003398.1-201ENST00000531124 318 ntBASIC13.84□□□□□ -0.19
TRIM23P36406 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TRIM23P36406 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC13.84□□□□□ -0.19
TRIM23P36406 RN7SL357P-201ENST00000581065 298 ntBASIC13.84□□□□□ -0.19
TRIM23P36406 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC13.84□□□□□ -0.19
TRIM23P36406 AC073911.3-201ENST00000624401 631 ntBASIC13.84□□□□□ -0.19
TRIM23P36406 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
TRIM23P36406 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM23P36406 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.84□□□□□ -0.19
TRIM23P36406 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM23P36406 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM23P36406 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM23P36406 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.84□□□□□ -0.19
TRIM23P36406 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM23P36406 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.84□□□□□ -0.19
TRIM23P36406 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC13.84□□□□□ -0.19
TRIM23P36406 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM23P36406 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRIM23P36406 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC13.83□□□□□ -0.19
TRIM23P36406 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC13.83□□□□□ -0.19
TRIM23P36406 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
TRIM23P36406 GOLGA8UP-201ENST00000527159 1755 ntBASIC13.83□□□□□ -0.19
TRIM23P36406 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
TRIM23P36406 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRIM23P36406 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.19
TRIM23P36406 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRIM23P36406 LINC02486-201ENST00000604157 3000 ntBASIC13.83□□□□□ -0.19
TRIM23P36406 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM23P36406 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
TRIM23P36406 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.83□□□□□ -0.2
TRIM23P36406 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
TRIM23P36406 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM23P36406 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM23P36406 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TRIM23P36406 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM23P36406 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC13.83□□□□□ -0.2
TRIM23P36406 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRIM23P36406 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms