Protein–RNA interactions for Protein: Q9NQP4

PFDN4, Prefoldin subunit 4, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4Q9NQP4 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PFDN4Q9NQP4 AC005229.1-201ENST00000392885 409 ntBASIC14.05□□□□□ -0.16
PFDN4Q9NQP4 AL391647.1-201ENST00000395664 511 ntBASIC14.05□□□□□ -0.16
PFDN4Q9NQP4 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.05□□□□□ -0.16
PFDN4Q9NQP4 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.05□□□□□ -0.16
PFDN4Q9NQP4 KRT43P-201ENST00000434019 910 ntBASIC14.05□□□□□ -0.16
PFDN4Q9NQP4 FAM8A4P-201ENST00000435433 1213 ntBASIC14.05□□□□□ -0.16
PFDN4Q9NQP4 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.05□□□□□ -0.16
PFDN4Q9NQP4 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PFDN4Q9NQP4 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.05□□□□□ -0.16
PFDN4Q9NQP4 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PFDN4Q9NQP4 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PFDN4Q9NQP4 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PFDN4Q9NQP4 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.05□□□□□ -0.16
PFDN4Q9NQP4 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.05□□□□□ -0.16
PFDN4Q9NQP4 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.05□□□□□ -0.16
PFDN4Q9NQP4 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.05□□□□□ -0.16
PFDN4Q9NQP4 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.05□□□□□ -0.16
PFDN4Q9NQP4 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.05□□□□□ -0.16
PFDN4Q9NQP4 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.05□□□□□ -0.16
PFDN4Q9NQP4 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.05□□□□□ -0.16
PFDN4Q9NQP4 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PFDN4Q9NQP4 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PFDN4Q9NQP4 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.05□□□□□ -0.16
PFDN4Q9NQP4 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
PFDN4Q9NQP4 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PFDN4Q9NQP4 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PFDN4Q9NQP4 PDE5A-202ENST00000354960 7154 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
PFDN4Q9NQP4 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PFDN4Q9NQP4 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC14.05□□□□□ -0.16
PFDN4Q9NQP4 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.05□□□□□ -0.16
PFDN4Q9NQP4 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PFDN4Q9NQP4 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC14.05□□□□□ -0.16
PFDN4Q9NQP4 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PFDN4Q9NQP4 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PFDN4Q9NQP4 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PFDN4Q9NQP4 NUP58-206ENST00000463407 6360 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PFDN4Q9NQP4 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PFDN4Q9NQP4 XIRP1-201ENST00000340369 6460 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
PFDN4Q9NQP4 TRIM80P-201ENST00000455685 2848 ntBASIC14.05□□□□□ -0.16
PFDN4Q9NQP4 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 AGAP10P-201ENST00000454844 2418 ntBASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 CD8B2-202ENST00000417670 633 ntBASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 AL590640.2-201ENST00000457038 527 ntBASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 RNA5SP486-201ENST00000515961 83 ntBASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 AC025279.2-201ENST00000569730 653 ntBASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 AC072061.1-201ENST00000569710 2234 ntBASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 AL354989.2-201ENST00000435838 1540 ntBASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 EXOC8-201ENST00000366645 5100 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
PFDN4Q9NQP4 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms