Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 MSTO2P-201ENST00000314835 1709 ntBASIC15.67■□□□□ 0.1
TPM1P09493 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TPM1P09493 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TPM1P09493 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TPM1P09493 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC15.67■□□□□ 0.1
TPM1P09493 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TPM1P09493 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TPM1P09493 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TPM1P09493 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TPM1P09493 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TPM1P09493 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TPM1P09493 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TPM1P09493 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC15.66■□□□□ 0.1
TPM1P09493 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
TPM1P09493 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TPM1P09493 AC061965.1-201ENST00000560524 1465 ntBASIC15.66■□□□□ 0.1
TPM1P09493 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TPM1P09493 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
TPM1P09493 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC15.66■□□□□ 0.1
TPM1P09493 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TPM1P09493 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TPM1P09493 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TPM1P09493 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TPM1P09493 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.66■□□□□ 0.1
TPM1P09493 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.66■□□□□ 0.1
TPM1P09493 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC15.66■□□□□ 0.1
TPM1P09493 ACTG1P3-201ENST00000431775 1114 ntBASIC15.66■□□□□ 0.1
TPM1P09493 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.66■□□□□ 0.1
TPM1P09493 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TPM1P09493 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.66■□□□□ 0.1
TPM1P09493 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.66■□□□□ 0.1
TPM1P09493 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC15.66■□□□□ 0.1
TPM1P09493 TDH-203ENST00000531764 1110 ntBASIC15.66■□□□□ 0.1
TPM1P09493 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.66■□□□□ 0.1
TPM1P09493 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.66■□□□□ 0.1
TPM1P09493 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC15.66■□□□□ 0.1
TPM1P09493 ECM1P1-201ENST00000604092 1279 ntBASIC15.66■□□□□ 0.1
TPM1P09493 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.66■□□□□ 0.1
TPM1P09493 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.66■□□□□ 0.1
TPM1P09493 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TPM1P09493 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TPM1P09493 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TPM1P09493 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
TPM1P09493 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TPM1P09493 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TPM1P09493 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TPM1P09493 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC15.66■□□□□ 0.1
TPM1P09493 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TPM1P09493 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC15.66■□□□□ 0.1
TPM1P09493 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TPM1P09493 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TPM1P09493 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC15.66■□□□□ 0.1
TPM1P09493 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TPM1P09493 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TPM1P09493 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC15.65■□□□□ 0.1
TPM1P09493 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TPM1P09493 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TPM1P09493 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TPM1P09493 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC15.65■□□□□ 0.1
TPM1P09493 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC15.65■□□□□ 0.1
TPM1P09493 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TPM1P09493 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC15.65■□□□□ 0.1
TPM1P09493 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC15.65■□□□□ 0.1
TPM1P09493 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
TPM1P09493 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TPM1P09493 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.65■□□□□ 0.1
TPM1P09493 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TPM1P09493 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
TPM1P09493 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TPM1P09493 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC15.65■□□□□ 0.1
TPM1P09493 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TPM1P09493 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC15.65■□□□□ 0.1
TPM1P09493 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TPM1P09493 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TPM1P09493 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TPM1P09493 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TPM1P09493 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TPM1P09493 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TPM1P09493 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.65■□□□□ 0.1
TPM1P09493 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC15.65■□□□□ 0.1
TPM1P09493 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TPM1P09493 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.65■□□□□ 0.1
TPM1P09493 AL355864.2-201ENST00000447420 863 ntBASIC15.65■□□□□ 0.1
TPM1P09493 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.65■□□□□ 0.1
TPM1P09493 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.65■□□□□ 0.1
TPM1P09493 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.65■□□□□ 0.1
TPM1P09493 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.65■□□□□ 0.1
TPM1P09493 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.65■□□□□ 0.1
TPM1P09493 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TPM1P09493 DRG2-220ENST00000583355 891 ntTSL 3 BASIC15.65■□□□□ 0.1
TPM1P09493 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.65■□□□□ 0.1
TPM1P09493 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TPM1P09493 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.65■□□□□ 0.1
TPM1P09493 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC15.65■□□□□ 0.1
TPM1P09493 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TPM1P09493 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TPM1P09493 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
TPM1P09493 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC15.65■□□□□ 0.1
TPM1P09493 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC15.65■□□□□ 0.1
TPM1P09493 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms