Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
POLR1DQ9Y2S0 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20■□□□□ 0.79
POLR1DQ9Y2S0 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
POLR1DQ9Y2S0 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20■□□□□ 0.79
POLR1DQ9Y2S0 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20■□□□□ 0.79
POLR1DQ9Y2S0 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
POLR1DQ9Y2S0 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20■□□□□ 0.79
POLR1DQ9Y2S0 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
POLR1DQ9Y2S0 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
POLR1DQ9Y2S0 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
POLR1DQ9Y2S0 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
POLR1DQ9Y2S0 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
POLR1DQ9Y2S0 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
POLR1DQ9Y2S0 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.99■□□□□ 0.79
POLR1DQ9Y2S0 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.99■□□□□ 0.79
POLR1DQ9Y2S0 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
POLR1DQ9Y2S0 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
POLR1DQ9Y2S0 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.99■□□□□ 0.79
POLR1DQ9Y2S0 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
POLR1DQ9Y2S0 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
POLR1DQ9Y2S0 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
POLR1DQ9Y2S0 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.98■□□□□ 0.79
POLR1DQ9Y2S0 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
POLR1DQ9Y2S0 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.98■□□□□ 0.79
POLR1DQ9Y2S0 BX664725.1-201ENST00000438252 379 ntBASIC19.98■□□□□ 0.79
POLR1DQ9Y2S0 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
POLR1DQ9Y2S0 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
POLR1DQ9Y2S0 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.98■□□□□ 0.79
POLR1DQ9Y2S0 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
POLR1DQ9Y2S0 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
POLR1DQ9Y2S0 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.98■□□□□ 0.79
POLR1DQ9Y2S0 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.98■□□□□ 0.79
POLR1DQ9Y2S0 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
POLR1DQ9Y2S0 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
POLR1DQ9Y2S0 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
POLR1DQ9Y2S0 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.97■□□□□ 0.79
POLR1DQ9Y2S0 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.97■□□□□ 0.79
POLR1DQ9Y2S0 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.97■□□□□ 0.79
POLR1DQ9Y2S0 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
POLR1DQ9Y2S0 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
POLR1DQ9Y2S0 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.97■□□□□ 0.79
POLR1DQ9Y2S0 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
POLR1DQ9Y2S0 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
POLR1DQ9Y2S0 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
POLR1DQ9Y2S0 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
POLR1DQ9Y2S0 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
POLR1DQ9Y2S0 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
POLR1DQ9Y2S0 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.96■□□□□ 0.79
POLR1DQ9Y2S0 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
POLR1DQ9Y2S0 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.96■□□□□ 0.79
POLR1DQ9Y2S0 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
POLR1DQ9Y2S0 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
POLR1DQ9Y2S0 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.96■□□□□ 0.79
POLR1DQ9Y2S0 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
POLR1DQ9Y2S0 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
POLR1DQ9Y2S0 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
POLR1DQ9Y2S0 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.95■□□□□ 0.78
POLR1DQ9Y2S0 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
POLR1DQ9Y2S0 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
POLR1DQ9Y2S0 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
POLR1DQ9Y2S0 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
POLR1DQ9Y2S0 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.95■□□□□ 0.78
POLR1DQ9Y2S0 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.95■□□□□ 0.78
POLR1DQ9Y2S0 AC137630.3-201ENST00000607245 391 ntBASIC19.95■□□□□ 0.78
POLR1DQ9Y2S0 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
POLR1DQ9Y2S0 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
POLR1DQ9Y2S0 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.94■□□□□ 0.78
POLR1DQ9Y2S0 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
POLR1DQ9Y2S0 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
POLR1DQ9Y2S0 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
POLR1DQ9Y2S0 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.94■□□□□ 0.78
POLR1DQ9Y2S0 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.94■□□□□ 0.78
POLR1DQ9Y2S0 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.94■□□□□ 0.78
POLR1DQ9Y2S0 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
POLR1DQ9Y2S0 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
POLR1DQ9Y2S0 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.94■□□□□ 0.78
POLR1DQ9Y2S0 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
POLR1DQ9Y2S0 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.94■□□□□ 0.78
POLR1DQ9Y2S0 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
POLR1DQ9Y2S0 AC092068.2-201ENST00000590491 1708 ntBASIC19.93■□□□□ 0.78
POLR1DQ9Y2S0 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
POLR1DQ9Y2S0 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.93■□□□□ 0.78
POLR1DQ9Y2S0 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.93■□□□□ 0.78
POLR1DQ9Y2S0 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
POLR1DQ9Y2S0 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
POLR1DQ9Y2S0 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.93■□□□□ 0.78
POLR1DQ9Y2S0 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.93■□□□□ 0.78
POLR1DQ9Y2S0 SNX5-217ENST00000606557 1087 ntBASIC19.93■□□□□ 0.78
POLR1DQ9Y2S0 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
POLR1DQ9Y2S0 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.93■□□□□ 0.78
POLR1DQ9Y2S0 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
POLR1DQ9Y2S0 AC068473.5-201ENST00000616428 2072 ntBASIC19.93■□□□□ 0.78
POLR1DQ9Y2S0 AC133561.1-201ENST00000568600 2415 ntBASIC19.93■□□□□ 0.78
POLR1DQ9Y2S0 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
POLR1DQ9Y2S0 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
POLR1DQ9Y2S0 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
POLR1DQ9Y2S0 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
POLR1DQ9Y2S0 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
POLR1DQ9Y2S0 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.92■□□□□ 0.78
POLR1DQ9Y2S0 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms