Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 OR8V1P-201ENST00000395193 873 ntBASIC13.7□□□□□ -0.22
KRTAP3-3Q9BYR6 AL035658.1-201ENST00000415054 357 ntTSL 3 BASIC13.7□□□□□ -0.22
KRTAP3-3Q9BYR6 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC13.7□□□□□ -0.22
KRTAP3-3Q9BYR6 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KRTAP3-3Q9BYR6 AL354692.1-201ENST00000423044 315 ntBASIC13.7□□□□□ -0.22
KRTAP3-3Q9BYR6 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC13.7□□□□□ -0.22
KRTAP3-3Q9BYR6 AC069540.1-201ENST00000446320 988 ntBASIC13.7□□□□□ -0.22
KRTAP3-3Q9BYR6 LYRM4-207ENST00000480566 941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KRTAP3-3Q9BYR6 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC13.7□□□□□ -0.22
KRTAP3-3Q9BYR6 AL136088.1-201ENST00000531002 541 ntTSL 4 BASIC13.7□□□□□ -0.22
KRTAP3-3Q9BYR6 AC073167.1-201ENST00000559303 580 ntTSL 5 BASIC13.7□□□□□ -0.22
KRTAP3-3Q9BYR6 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC13.7□□□□□ -0.22
KRTAP3-3Q9BYR6 Z98949.1-208ENST00000597614 816 ntTSL 5 BASIC13.7□□□□□ -0.22
KRTAP3-3Q9BYR6 AC242988.1-201ENST00000611044 714 ntTSL 3 BASIC13.7□□□□□ -0.22
KRTAP3-3Q9BYR6 AC106858.1-201ENST00000637497 429 ntBASIC13.7□□□□□ -0.22
KRTAP3-3Q9BYR6 RPL23AP49-202ENST00000638439 1138 ntTSL 5 BASIC13.7□□□□□ -0.22
KRTAP3-3Q9BYR6 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
KRTAP3-3Q9BYR6 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC13.7□□□□□ -0.22
KRTAP3-3Q9BYR6 AL807752.1-201ENST00000395082 1322 ntBASIC13.69□□□□□ -0.22
KRTAP3-3Q9BYR6 RNU6-304P-201ENST00000364855 107 ntBASIC13.69□□□□□ -0.22
KRTAP3-3Q9BYR6 RNU6-648P-201ENST00000410190 107 ntBASIC13.69□□□□□ -0.22
KRTAP3-3Q9BYR6 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC13.69□□□□□ -0.22
KRTAP3-3Q9BYR6 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC13.69□□□□□ -0.22
KRTAP3-3Q9BYR6 AL035246.1-201ENST00000433554 1255 ntBASIC13.69□□□□□ -0.22
KRTAP3-3Q9BYR6 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC13.69□□□□□ -0.22
KRTAP3-3Q9BYR6 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC13.69□□□□□ -0.22
KRTAP3-3Q9BYR6 RSL24D1P3-201ENST00000449255 495 ntBASIC13.69□□□□□ -0.22
KRTAP3-3Q9BYR6 AC108475.1-201ENST00000507880 950 ntBASIC13.69□□□□□ -0.22
KRTAP3-3Q9BYR6 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
KRTAP3-3Q9BYR6 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC13.69□□□□□ -0.22
KRTAP3-3Q9BYR6 AL050303.3-201ENST00000613704 284 ntBASIC13.69□□□□□ -0.22
KRTAP3-3Q9BYR6 ZNF365-211ENST00000614806 877 ntTSL 5 BASIC13.69□□□□□ -0.22
KRTAP3-3Q9BYR6 AC092140.2-201ENST00000618027 521 ntBASIC13.69□□□□□ -0.22
KRTAP3-3Q9BYR6 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC13.69□□□□□ -0.22
KRTAP3-3Q9BYR6 AC078883.4-201ENST00000623218 367 ntBASIC13.69□□□□□ -0.22
KRTAP3-3Q9BYR6 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
KRTAP3-3Q9BYR6 NUSAP1-203ENST00000450592 1301 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
KRTAP3-3Q9BYR6 AC008040.1-204ENST00000469301 1738 ntTSL 2 BASIC13.68□□□□□ -0.22
KRTAP3-3Q9BYR6 AL132996.1-201ENST00000569865 1431 ntTSL 5 BASIC13.68□□□□□ -0.22
KRTAP3-3Q9BYR6 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KRTAP3-3Q9BYR6 RN7SKP74-201ENST00000362849 309 ntBASIC13.68□□□□□ -0.22
KRTAP3-3Q9BYR6 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC13.68□□□□□ -0.22
KRTAP3-3Q9BYR6 AC119751.4-201ENST00000507498 357 ntBASIC13.68□□□□□ -0.22
KRTAP3-3Q9BYR6 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC13.68□□□□□ -0.22
KRTAP3-3Q9BYR6 RN7SKP52-201ENST00000516219 250 ntBASIC13.68□□□□□ -0.22
KRTAP3-3Q9BYR6 SCARNA1-201ENST00000517138 166 ntBASIC13.68□□□□□ -0.22
KRTAP3-3Q9BYR6 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC13.68□□□□□ -0.22
KRTAP3-3Q9BYR6 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
KRTAP3-3Q9BYR6 AC009269.2-201ENST00000559892 474 ntBASIC13.68□□□□□ -0.22
KRTAP3-3Q9BYR6 AC236972.3-202ENST00000620734 1222 ntTSL 3 BASIC13.68□□□□□ -0.22
KRTAP3-3Q9BYR6 AL158212.4-201ENST00000624062 1286 ntBASIC13.68□□□□□ -0.22
KRTAP3-3Q9BYR6 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
KRTAP3-3Q9BYR6 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
KRTAP3-3Q9BYR6 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
KRTAP3-3Q9BYR6 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
KRTAP3-3Q9BYR6 USMG5-205ENST00000369825 789 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
KRTAP3-3Q9BYR6 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC13.67□□□□□ -0.22
KRTAP3-3Q9BYR6 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
KRTAP3-3Q9BYR6 SETP10-201ENST00000424368 814 ntBASIC13.67□□□□□ -0.22
KRTAP3-3Q9BYR6 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC13.67□□□□□ -0.22
KRTAP3-3Q9BYR6 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC13.67□□□□□ -0.22
KRTAP3-3Q9BYR6 RPS3AP6-201ENST00000484430 795 ntBASIC13.67□□□□□ -0.22
KRTAP3-3Q9BYR6 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC13.67□□□□□ -0.22
KRTAP3-3Q9BYR6 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC13.67□□□□□ -0.22
KRTAP3-3Q9BYR6 AC008494.2-201ENST00000514544 370 ntBASIC13.67□□□□□ -0.22
KRTAP3-3Q9BYR6 HERC2P5-202ENST00000564458 1164 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
KRTAP3-3Q9BYR6 HERC2P8-203ENST00000564795 1164 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
KRTAP3-3Q9BYR6 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC13.67□□□□□ -0.22
KRTAP3-3Q9BYR6 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.67□□□□□ -0.22
KRTAP3-3Q9BYR6 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
KRTAP3-3Q9BYR6 BNIP3P38-201ENST00000601117 544 ntBASIC13.67□□□□□ -0.22
KRTAP3-3Q9BYR6 AL031775.1-201ENST00000607014 887 ntBASIC13.67□□□□□ -0.22
KRTAP3-3Q9BYR6 AC108747.1-201ENST00000609508 535 ntBASIC13.67□□□□□ -0.22
KRTAP3-3Q9BYR6 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
KRTAP3-3Q9BYR6 AC119674.1-217ENST00000641942 1086 ntBASIC13.67□□□□□ -0.22
KRTAP3-3Q9BYR6 PLAC8-201ENST00000311507 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KRTAP3-3Q9BYR6 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KRTAP3-3Q9BYR6 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
KRTAP3-3Q9BYR6 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC13.66□□□□□ -0.22
KRTAP3-3Q9BYR6 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC13.66□□□□□ -0.22
KRTAP3-3Q9BYR6 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC13.66□□□□□ -0.22
KRTAP3-3Q9BYR6 MORF4L1P6-201ENST00000418771 268 ntBASIC13.66□□□□□ -0.22
KRTAP3-3Q9BYR6 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC13.66□□□□□ -0.22
KRTAP3-3Q9BYR6 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC13.66□□□□□ -0.22
KRTAP3-3Q9BYR6 P2RX6P-201ENST00000439119 468 ntTSL 3 BASIC13.66□□□□□ -0.22
KRTAP3-3Q9BYR6 SCAND3P1-201ENST00000439854 1060 ntBASIC13.66□□□□□ -0.22
KRTAP3-3Q9BYR6 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC13.66□□□□□ -0.22
KRTAP3-3Q9BYR6 CSTA-202ENST00000479204 821 ntTSL 2 BASIC13.66□□□□□ -0.22
KRTAP3-3Q9BYR6 AC095050.1-201ENST00000502661 905 ntTSL 5 BASIC13.66□□□□□ -0.22
KRTAP3-3Q9BYR6 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
KRTAP3-3Q9BYR6 Metazoa_SRP.26-201ENST00000547793 284 ntBASIC13.66□□□□□ -0.22
KRTAP3-3Q9BYR6 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC13.66□□□□□ -0.22
KRTAP3-3Q9BYR6 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.66□□□□□ -0.22
KRTAP3-3Q9BYR6 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
KRTAP3-3Q9BYR6 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC13.66□□□□□ -0.22
KRTAP3-3Q9BYR6 RN7SL819P-201ENST00000581896 270 ntBASIC13.66□□□□□ -0.22
KRTAP3-3Q9BYR6 AC245884.10-201ENST00000597355 337 ntBASIC13.66□□□□□ -0.22
KRTAP3-3Q9BYR6 AL589765.6-201ENST00000601909 549 ntBASIC13.66□□□□□ -0.22
KRTAP3-3Q9BYR6 EAPP-205ENST00000618169 1237 ntTSL 5 BASIC13.66□□□□□ -0.22
KRTAP3-3Q9BYR6 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms