Protein–RNA interactions for Protein: Q03855

TY1B-DR1, Transposon Ty1-DR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-DR1Q03855 PMA1YGL008C 2757 nt6.02□□□□□ -1.45
TY1B-DR1Q03855 PBS2YJL128C 2007 nt6.02□□□□□ -1.45
TY1B-DR1Q03855 YGR161W-CYGR161W-C 279 nt6.01□□□□□ -1.45
TY1B-DR1Q03855 MET3YJR010W 1536 nt6.01□□□□□ -1.45
TY1B-DR1Q03855 ERG7YHR072W 2196 nt6.01□□□□□ -1.45
TY1B-DR1Q03855 DAL81YIR023W 2913 nt6.01□□□□□ -1.45
TY1B-DR1Q03855 LDB19YOR322C 2457 nt6.01□□□□□ -1.45
TY1B-DR1Q03855 YDR271CYDR271C 372 nt6.01□□□□□ -1.45
TY1B-DR1Q03855 YLR296WYLR296W 327 nt6.01□□□□□ -1.45
TY1B-DR1Q03855 YML131WYML131W 1098 nt6.01□□□□□ -1.45
TY1B-DR1Q03855 PPG1YNR032W 1107 nt6.01□□□□□ -1.45
TY1B-DR1Q03855 GUP2YPL189W 1830 nt6□□□□□ -1.45
TY1B-DR1Q03855 AAP1YHR047C 2571 nt6□□□□□ -1.45
TY1B-DR1Q03855 HSP104YLL026W 2727 nt6□□□□□ -1.45
TY1B-DR1Q03855 YGR018CYGR018C 330 nt5.98□□□□□ -1.45
TY1B-DR1Q03855 BNA1YJR025C 534 nt5.98□□□□□ -1.45
TY1B-DR1Q03855 AAD10YJR155W 867 nt5.98□□□□□ -1.45
TY1B-DR1Q03855 TDA8YAL064C-A 381 nt5.98□□□□□ -1.45
TY1B-DR1Q03855 PEX30YLR324W 1572 nt5.98□□□□□ -1.45
TY1B-DR1Q03855 MRPL7YDR237W 879 nt5.98□□□□□ -1.45
TY1B-DR1Q03855 YOR008W-BYOR008W-B 102 nt5.98□□□□□ -1.45
TY1B-DR1Q03855 ISA1YLL027W 753 nt5.97□□□□□ -1.45
TY1B-DR1Q03855 PRD1YCL057W 2139 nt5.96□□□□□ -1.46
TY1B-DR1Q03855 GAS3YMR215W 1575 nt5.96□□□□□ -1.46
TY1B-DR1Q03855 HXT7YDR342C 1713 nt5.96□□□□□ -1.46
TY1B-DR1Q03855 HXT6YDR343C 1713 nt5.96□□□□□ -1.46
TY1B-DR1Q03855 URA4YLR420W 1095 nt5.95□□□□□ -1.46
TY1B-DR1Q03855 SKG6YHR149C 2205 nt5.95□□□□□ -1.46
TY1B-DR1Q03855 YLR049CYLR049C 1287 nt5.95□□□□□ -1.46
TY1B-DR1Q03855 POF1YCL047C 777 nt5.95□□□□□ -1.46
TY1B-DR1Q03855 PBN1YCL052C 1251 nt5.95□□□□□ -1.46
TY1B-DR1Q03855 TSL1YML100W 3297 nt5.95□□□□□ -1.46
TY1B-DR1Q03855 AIR1YIL079C 1083 nt5.94□□□□□ -1.46
TY1B-DR1Q03855 MRP21YBL090W 534 nt5.94□□□□□ -1.46
TY1B-DR1Q03855 CTT1YGR088W 1689 nt5.94□□□□□ -1.46
TY1B-DR1Q03855 UBP9YER098W 2265 nt5.94□□□□□ -1.46
TY1B-DR1Q03855 MRT4YKL009W 711 nt5.93□□□□□ -1.46
TY1B-DR1Q03855 COX19YLL018C-A 297 nt5.93□□□□□ -1.46
TY1B-DR1Q03855 AIM3YBR108W 2844 nt5.93□□□□□ -1.46
TY1B-DR1Q03855 GDE1YPL110C 3672 nt5.93□□□□□ -1.46
TY1B-DR1Q03855 JLP1YLL057C 1239 nt5.93□□□□□ -1.46
TY1B-DR1Q03855 NRK1YNL129W 723 nt5.93□□□□□ -1.46
TY1B-DR1Q03855 ARC40YBR234C 1155 nt5.93□□□□□ -1.46
TY1B-DR1Q03855 JIP5YPR169W 1479 nt5.92□□□□□ -1.46
TY1B-DR1Q03855 tK(CUU)CtK(CUU)C 73 nt5.92□□□□□ -1.46
TY1B-DR1Q03855 tK(CUU)D1tK(CUU)D1 73 nt5.92□□□□□ -1.46
TY1B-DR1Q03855 tK(CUU)D2tK(CUU)D2 73 nt5.92□□□□□ -1.46
TY1B-DR1Q03855 tK(CUU)E1tK(CUU)E1 73 nt5.92□□□□□ -1.46
TY1B-DR1Q03855 tK(CUU)E2tK(CUU)E2 73 nt5.92□□□□□ -1.46
TY1B-DR1Q03855 tK(CUU)FtK(CUU)F 73 nt5.92□□□□□ -1.46
TY1B-DR1Q03855 tK(CUU)G1tK(CUU)G1 73 nt5.92□□□□□ -1.46
TY1B-DR1Q03855 tK(CUU)G2tK(CUU)G2 73 nt5.92□□□□□ -1.46
TY1B-DR1Q03855 tK(CUU)G3tK(CUU)G3 73 nt5.92□□□□□ -1.46
TY1B-DR1Q03855 tK(CUU)ItK(CUU)I 73 nt5.92□□□□□ -1.46
TY1B-DR1Q03855 tK(CUU)JtK(CUU)J 73 nt5.92□□□□□ -1.46
TY1B-DR1Q03855 tK(CUU)KtK(CUU)K 73 nt5.92□□□□□ -1.46
TY1B-DR1Q03855 tK(CUU)MtK(CUU)M 73 nt5.92□□□□□ -1.46
TY1B-DR1Q03855 tK(CUU)PtK(CUU)P 73 nt5.92□□□□□ -1.46
TY1B-DR1Q03855 YIM1YMR152W 1098 nt5.92□□□□□ -1.46
TY1B-DR1Q03855 YNR061CYNR061C 660 nt5.92□□□□□ -1.46
TY1B-DR1Q03855 MRP51YPL118W 1035 nt5.92□□□□□ -1.46
TY1B-DR1Q03855 NOG1YPL093W 1944 nt5.92□□□□□ -1.46
TY1B-DR1Q03855 NUP1YOR098C 3231 nt5.92□□□□□ -1.46
TY1B-DR1Q03855 CMK1YFR014C 1341 nt5.92□□□□□ -1.46
TY1B-DR1Q03855 TFC7YOR110W 1308 nt5.92□□□□□ -1.46
TY1B-DR1Q03855 HST1YOL068C 1512 nt5.92□□□□□ -1.46
TY1B-DR1Q03855 YDL121CYDL121C 450 nt5.91□□□□□ -1.46
TY1B-DR1Q03855 ALG9YNL219C 1668 nt5.91□□□□□ -1.46
TY1B-DR1Q03855 RMD1YDL001W 1293 nt5.9□□□□□ -1.46
TY1B-DR1Q03855 GPP1YIL053W 753 nt5.9□□□□□ -1.46
TY1B-DR1Q03855 YDR056CYDR056C 618 nt5.9□□□□□ -1.47
TY1B-DR1Q03855 PLP2YOR281C 861 nt5.9□□□□□ -1.47
TY1B-DR1Q03855 POP4YBR257W 840 nt5.9□□□□□ -1.47
TY1B-DR1Q03855 ADE6YGR061C 4077 nt5.9□□□□□ -1.47
TY1B-DR1Q03855 VID22YLR373C 2706 nt5.89□□□□□ -1.47
TY1B-DR1Q03855 FRE3YOR381W 2136 nt5.89□□□□□ -1.47
TY1B-DR1Q03855 TRM8YDL201W 861 nt5.89□□□□□ -1.47
TY1B-DR1Q03855 CHK1YBR274W 1584 nt5.88□□□□□ -1.47
TY1B-DR1Q03855 OAR1YKL055C 837 nt5.88□□□□□ -1.47
TY1B-DR1Q03855 EMP47YFL048C 1338 nt5.88□□□□□ -1.47
TY1B-DR1Q03855 LCB2YDR062W 1686 nt5.88□□□□□ -1.47
TY1B-DR1Q03855 RMR1YGL250W 726 nt5.87□□□□□ -1.47
TY1B-DR1Q03855 COQ5YML110C 924 nt5.87□□□□□ -1.47
TY1B-DR1Q03855 SOL4YGR248W 768 nt5.86□□□□□ -1.47
TY1B-DR1Q03855 RAD2YGR258C 3096 nt5.86□□□□□ -1.47
TY1B-DR1Q03855 HOYDL227C 1761 nt5.86□□□□□ -1.47
TY1B-DR1Q03855 YDR250CYDR250C 276 nt5.85□□□□□ -1.47
TY1B-DR1Q03855 YEL074WYEL074W 339 nt5.85□□□□□ -1.47
TY1B-DR1Q03855 LCB5YLR260W 2064 nt5.85□□□□□ -1.47
TY1B-DR1Q03855 RPG1YBR079C 2895 nt5.85□□□□□ -1.47
TY1B-DR1Q03855 CAT5YOR125C 702 nt5.85□□□□□ -1.47
TY1B-DR1Q03855 YBR056W-AYBR056W-A 201 nt5.85□□□□□ -1.47
TY1B-DR1Q03855 EFM2YBR271W 1260 nt5.85□□□□□ -1.47
TY1B-DR1Q03855 MSB2YGR014W 3921 nt5.84□□□□□ -1.47
TY1B-DR1Q03855 AGE2YIL044C 897 nt5.84□□□□□ -1.47
TY1B-DR1Q03855 YBL036CYBL036C 774 nt5.84□□□□□ -1.47
TY1B-DR1Q03855 NOC4YPR144C 1659 nt5.84□□□□□ -1.47
TY1B-DR1Q03855 CDC15YAR019C 2925 nt5.84□□□□□ -1.48
TY1B-DR1Q03855 TGL4YKR089C 2733 nt5.83□□□□□ -1.48
TY1B-DR1Q03855 FUN30YAL019W 3396 nt5.83□□□□□ -1.48
Retrieved 100 of 7,029 protein–RNA pairs in 15.4 ms